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PlasmoDB-67_PbergheiANKA.gff.gz
PlasmoDB-67_PbergheiANKA.gff.gz
 
 
README.md
README.md
 
 
barseq_paper.R
barseq_paper.R
 
 
convert_sanger_counts.R
convert_sanger_counts.R
 
 
count.R
count.R
 
 
count_barseq.R
count_barseq.R
 
 
count_crispr.R
count_crispr.R
 
 
global.R
global.R
 
 
grstats.R
grstats.R
 
 
malcrispr_figures.R
malcrispr_figures.R
 
 
server.R
server.R
 
 
start.R
start.R
 
 
start.sh
start.sh
 
 
ui.R
ui.R
 
 

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count.R -- takes all FASTQ files (CRISPR or BARSEQ) and outputs count matrices grstats.R -- takes count files and generates statistics barseq_paper.R -- generates plots for BARSEQ study crispr_methods_paper.R -- generates plots for the first CRISPR methods study

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