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Implementing tension statistics #333

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Implementing tension statistics #333

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Commits on Aug 24, 2023

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Commits on Aug 31, 2023

  1. Added Class tension

    DilyOng committed Aug 31, 2023
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Commits on Sep 30, 2023

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  2. version bump to 2.5.0

    lukashergt committed Sep 30, 2023
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Commits on Oct 13, 2023

  1. Created a function called tension_stats for tension statistics calcul…

    …ation and testing it with correlated gaussian likelihoods. Found a problem with the function anesthetic.examples.perfect_ns.correlated_gaussian. The generated likelihood gaussian in the parameters is not normalised and the evidence is not unity. Need to take into account the LogLmax.
    DilyOng committed Oct 13, 2023
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  2. Added logLmax to the function anesthetic.examples.perfect_ns.correlat…

    …ed_gaussian. Within the correlated_gaussian function, changed logLike function. Changed the function's description to match the fact that evidence is not unity.
    DilyOng committed Oct 13, 2023
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  3. Clean up old tension statistics files. Put the correlated guassian li…

    …kelihood test case with the tests folder.
    DilyOng committed Oct 13, 2023
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  5. Updated logLmax

    DilyOng committed Oct 13, 2023
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Commits on Oct 14, 2023

  1. remove DS_Store

    AdamOrmondroyd committed Oct 14, 2023
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Commits on Oct 26, 2023

  1. Added a file tension.py to anesthetic/anesthetic and it contains a fu…

    …nction tension_stats() for calculating tension statistics. Rewrote the test_tension_stats.py in tests to match the format of other files. It tests mock datasets with guassian likelihood. Both compatiable and incompatiable datasets have passed the test.
    DilyOng committed Oct 26, 2023
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  2. Updated the tests/test_tension_stats.py file for flake8 compliance. A…

    …dd a file for datasets pairwise_comparison, but not completed
    DilyOng committed Oct 26, 2023
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Commits on Dec 5, 2023

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Commits on Mar 4, 2024

  1. Updated anesthetic/tests/test_tension_stats.py. Now it tests whether …

    …the theoretical logR, logS and logI values sit within 3 std of the numerical solution's distribution from anesthetic, instead of testing between minimum and maximum values of the distribution.
    DilyOng committed Mar 4, 2024
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Commits on Mar 5, 2024

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  3. Deleted duplicate files.

    DilyOng committed Mar 5, 2024
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Commits on Mar 18, 2024

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  2. Reorganised tests

    williamjameshandley committed Mar 18, 2024
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  3. numpy linalg

    williamjameshandley committed Mar 18, 2024
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Commits on Mar 20, 2024

  1. For anesthetic.tension.tension_stats(), I 1) added docstrings, 2) add…

    …ed latex labels, 3) set nsamples=None and beta=None to match NestedSamples.stats, 4) changed samples to samples_stats for a more instructive name. I have tested the updated anesthetic.tension.tension_stats() using the tests/test_tension.py and no AssertionError is raised. I printed out the output of tension_stats() and checked that the latex labels are fine.
    DilyOng committed Mar 20, 2024
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Commits on Mar 21, 2024

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  2. Fixed pydocstyle issue.

    DilyOng committed Mar 21, 2024
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  3. Fixed pydocstyle issue.

    DilyOng committed Mar 21, 2024
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Commits on Apr 4, 2024

  1. In test_tension.py, 1) added a test for latex labels, and 2) changed …

    …the volume V to 6 and changed the bounds.
    DilyOng committed Apr 4, 2024
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  2. Changed V

    DilyOng committed Apr 4, 2024
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Commits on Apr 5, 2024

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Commits on Apr 8, 2024

  1. Corrected typo

    williamjameshandley committed Apr 8, 2024
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  3. fix link in docstring

    lukashergt committed Apr 8, 2024
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Commits on Apr 9, 2024

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Commits on Apr 14, 2024

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Commits on Sep 19, 2024

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  4. replaced \\m

    williamjameshandley committed Sep 19, 2024
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Commits on Sep 27, 2024

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  3. surround @ by spaces

    lukashergt committed Sep 27, 2024
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  8. optionally allow for passing a pre-computed stats instance to tension…

    … computation to save computing time for high-nsamples runs
    lukashergt committed Sep 27, 2024
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  9. simplify tension tests and add test for direct input of nested sampli…

    …ng stats to tension stats
    lukashergt committed Sep 27, 2024
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  10. Update README.rst

    lukashergt authored Sep 27, 2024
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  11. Update _version.py

    lukashergt authored Sep 27, 2024
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