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Implementing tension statistics #333
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Commits on Aug 24, 2023
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Commits on Aug 31, 2023
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Commits on Sep 30, 2023
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Commits on Oct 13, 2023
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Created a function called tension_stats for tension statistics calcul…
…ation and testing it with correlated gaussian likelihoods. Found a problem with the function anesthetic.examples.perfect_ns.correlated_gaussian. The generated likelihood gaussian in the parameters is not normalised and the evidence is not unity. Need to take into account the LogLmax.
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Added logLmax to the function anesthetic.examples.perfect_ns.correlat…
…ed_gaussian. Within the correlated_gaussian function, changed logLike function. Changed the function's description to match the fact that evidence is not unity.
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Clean up old tension statistics files. Put the correlated guassian li…
…kelihood test case with the tests folder.
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Commits on Oct 14, 2023
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Commits on Oct 26, 2023
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Added a file tension.py to anesthetic/anesthetic and it contains a fu…
…nction tension_stats() for calculating tension statistics. Rewrote the test_tension_stats.py in tests to match the format of other files. It tests mock datasets with guassian likelihood. Both compatiable and incompatiable datasets have passed the test.
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Updated the tests/test_tension_stats.py file for flake8 compliance. A…
…dd a file for datasets pairwise_comparison, but not completed
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Commits on Dec 5, 2023
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Commits on Mar 4, 2024
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Updated anesthetic/tests/test_tension_stats.py. Now it tests whether …
…the theoretical logR, logS and logI values sit within 3 std of the numerical solution's distribution from anesthetic, instead of testing between minimum and maximum values of the distribution.
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Commits on Mar 5, 2024
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Commits on Mar 18, 2024
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Commits on Mar 20, 2024
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For anesthetic.tension.tension_stats(), I 1) added docstrings, 2) add…
…ed latex labels, 3) set nsamples=None and beta=None to match NestedSamples.stats, 4) changed samples to samples_stats for a more instructive name. I have tested the updated anesthetic.tension.tension_stats() using the tests/test_tension.py and no AssertionError is raised. I printed out the output of tension_stats() and checked that the latex labels are fine.
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Commits on Mar 21, 2024
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Commits on Apr 4, 2024
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In test_tension.py, 1) added a test for latex labels, and 2) changed …
…the volume V to 6 and changed the bounds.
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Commits on Apr 5, 2024
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Commits on Apr 8, 2024
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Commits on Apr 9, 2024
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Commits on Sep 27, 2024
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optionally allow for passing a pre-computed stats instance to tension…
… computation to save computing time for high-nsamples runs
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simplify tension tests and add test for direct input of nested sampli…
…ng stats to tension stats
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