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  1. tanghaibao/jcvi tanghaibao/jcvi Public

    Python library to facilitate genome assembly, annotation, and comparative genomics

    Python 808 190

  2. MrOlm/inStrain MrOlm/inStrain Public

    Bioinformatics program inStrain

    Python 161 36

  3. chrisquince/DESMAN chrisquince/DESMAN Public

    De novo Extraction of Strains from MetAgeNomes

    Python 68 22

  4. liaoherui/StrainScan liaoherui/StrainScan Public

    High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers

    Python 40 6