Update to v0.5.7

hackingmaterials · Jun 5, 2019 · ab9cdee · ab9cdee
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diff --git a/docs/_sources/changelog.rst.txt b/docs/_sources/changelog.rst.txt
@@ -5,6 +5,13 @@
 matminer Changelog
 ==================
 
+**v0.5.7**
+
+* remove SOAP normalization flag (K. Murakoa)
+* fix precheck - Miedema and YangSolidSolution (Q. Wang)
+* improvements to Miedema - default structure types, docs (Q. Wang)
+* fix CGCNN optimizer (Q. Wang)
+
 **v0.5.6**
 
 * add Global Instability Index featurizer (N. Wagner)

diff --git a/docs/_sources/index.rst.txt b/docs/_sources/index.rst.txt
@@ -14,6 +14,8 @@ matminer works with the `pandas <https://pandas.pydata.org>`_ data format in ord
 
 matminer is `open source <https://github.com/hackingmaterials/matminer>`_ via a BSD-style license.
 
+If you like matminer, you might also check out `automatminer <https://github.com/hackingmaterials/automatminer>`_ which automatically fits a machine learning pipeline to your problem using matminer descriptors.
+
 
 -------------------
 Installing matminer

diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '0.5.6',
+    VERSION: '0.5.7',
     LANGUAGE: 'None',
     COLLAPSE_INDEX: false,
     FILE_SUFFIX: '.html',

diff --git a/docs/changelog.html b/docs/changelog.html
@@ -6,7 +6,7 @@
   <head>
     <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-    <title>MatMiner Changelog &#8212; matminer 0.5.6 documentation</title>
+    <title>MatMiner Changelog &#8212; matminer 0.5.7 documentation</title>
     <link rel="stylesheet" href="_static/nature.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <script type="text/javascript" id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>  
 
@@ -39,6 +39,13 @@ <h3>Navigation</h3>
 
   <div class="section" id="matminer-changelog">
 <h1>matminer Changelog<a class="headerlink" href="#matminer-changelog" title="Permalink to this headline">¶</a></h1>
+<p><strong>v0.5.7</strong></p>
+<ul class="simple">
+<li>remove SOAP normalization flag (K. Murakoa)</li>
+<li>fix precheck - Miedema and YangSolidSolution (Q. Wang)</li>
+<li>improvements to Miedema - default structure types, docs (Q. Wang)</li>
+<li>fix CGCNN optimizer (Q. Wang)</li>
+</ul>
 <p><strong>v0.5.6</strong></p>
 <ul class="simple">
 <li>add Global Instability Index featurizer (N. Wagner)</li>
@@ -443,7 +450,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>
 

diff --git a/docs/contributors.html b/docs/contributors.html
@@ -6,7 +6,7 @@
   <head>
     <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-    <title>MatMiner Contributors &#8212; matminer 0.5.6 documentation</title>
+    <title>MatMiner Contributors &#8212; matminer 0.5.7 documentation</title>
     <link rel="stylesheet" href="_static/nature.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <script type="text/javascript" id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>  
 
@@ -144,7 +144,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>
 

diff --git a/docs/dataset_addition_guide.html b/docs/dataset_addition_guide.html
@@ -6,7 +6,7 @@
   <head>
     <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-    <title>Guide to adding datasets to matminer &#8212; matminer 0.5.6 documentation</title>
+    <title>Guide to adding datasets to matminer &#8212; matminer 0.5.7 documentation</title>
     <link rel="stylesheet" href="_static/nature.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <script type="text/javascript" id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>  
 
@@ -333,7 +333,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>
 

diff --git a/docs/dataset_summary.html b/docs/dataset_summary.html
@@ -6,7 +6,7 @@
   <head>
     <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-    <title>Datasets Available in Matminer &#8212; matminer 0.5.6 documentation</title>
+    <title>Datasets Available in Matminer &#8212; matminer 0.5.7 documentation</title>
     <link rel="stylesheet" href="_static/nature.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <script type="text/javascript" id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>  
 
@@ -1907,7 +1907,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>
 

diff --git a/docs/example_bulkmod.html b/docs/example_bulkmod.html
@@ -6,7 +6,7 @@
   <head>
     <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-    <title>Predicting bulk moduli with matminer &#8212; matminer 0.5.6 documentation</title>
+    <title>Predicting bulk moduli with matminer &#8212; matminer 0.5.7 documentation</title>
     <link rel="stylesheet" href="_static/nature.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <script type="text/javascript" id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>  
 
@@ -361,7 +361,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>
 

diff --git a/docs/featurizer_summary.html b/docs/featurizer_summary.html
@@ -6,7 +6,7 @@
   <head>
     <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-    <title>Table of Featurizers &#8212; matminer 0.5.6 documentation</title>
+    <title>Table of Featurizers &#8212; matminer 0.5.7 documentation</title>
     <link rel="stylesheet" href="_static/nature.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <script type="text/javascript" id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>  
 
@@ -501,7 +501,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.6 documentation</a> &#187;</li> 
+        <li class="nav-item nav-item-0"><a href="index.html">matminer 0.5.7 documentation</a> &#187;</li> 
       </ul>
     </div>