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biodiversity-genomics-scripts

A bunch of scripts to retrieve gff3 data (NCBI and Ensembl)

get_ncbi_annotations

this script takes the path of a file containing the list of assembly accessions as input (/n-separated) and the output file path and outputs a tsv file containing the NCBI FTP server path of the matched assemblies

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A bunch of scripts to retrieve biodiversity genomics data (NCBI and Ensembl)

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