fix: make _safe_write_json actually atomic with mkstemp + os.replace - #3971
Open
Quratulain-bilal wants to merge 1 commit into
Open
fix: make _safe_write_json actually atomic with mkstemp + os.replace#3971Quratulain-bilal wants to merge 1 commit into
Quratulain-bilal wants to merge 1 commit into
Conversation
Despite its name, _safe_write_json used write_text() which truncates the file before writing. A crash or power loss mid-write leaves a partial JSON file. Now uses tempfile.mkstemp + os.replace for atomic writes, matching the pattern used in _utils.py, shared_infra.py, and other safe-write utilities in the codebase.
Contributor
There was a problem hiding this comment.
Pull request overview
Makes event configuration JSON writes atomic using a temporary file and os.replace.
Changes:
- Writes JSON to a same-directory temporary file.
- Cleans up temporary files on failure.
Show a summary per file
| File | Description |
|---|---|
src/specify_cli/events.py |
Adds atomic JSON replacement logic. |
Review details
馃挕 Add a code-review agent skill or configure MCP servers for context-aware, tailored reviews. Learn more in the docs.
Suppressed comments (1)
src/specify_cli/events.py:2024
mkstempcreates the staged file with mode0600, andos.replaceswaps that inode over the existing config. Unlike the previouswrite_textcall, this silently changes permissions (and potentially ownership) on every merge, which can lock other users or processes out of shared0640/0644config files. Preserve the existing file metadata before replacing it, as the atomic writer insrc/specify_cli/_utils.py:163-193does.
os.replace(tmp, dst)
- Files reviewed: 1/1 changed files
- Comments generated: 1
- Review effort level: Balanced
| with os.fdopen(fd, "w", encoding="utf-8") as f: | ||
| json.dump(data, f, indent=2) | ||
| f.write("\n") | ||
| os.replace(tmp, dst) |
mnriem
requested changes
Aug 13, 2026
mnriem
left a comment
Collaborator
There was a problem hiding this comment.
Please address Copilot feedback
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Problem
Despite its name, _safe_write_json used write_text() which truncates the file before writing. A crash or power loss mid-write leaves a partial JSON file. This function is called by _merge_copilot_json, _merge_opencode_plugin_ref, etc., meaning all Copilot and OpenCode event config writes were non-atomic.
Fix
Now uses empfile.mkstemp + os.replace for atomic writes, matching the pattern used in _utils.py, shared_infra.py, and other safe-write utilities in the codebase.