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Adding WOMtools validation GitHub Action
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tefirman committed Dec 12, 2024
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32 changes: 32 additions & 0 deletions .github/workflows/womtools-validate.yml
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name: WOMtool Validation of WDL Script

on:
pull_request:
types: [opened, reopened, synchronize]

permissions:
contents: read
packages: write

jobs:
womtoolval:
runs-on: ubuntu-latest
steps:
-
name: Checkout
uses: actions/checkout@v4
-
name: Set Up Java
uses: actions/setup-java@v4
with:
distribution: 'temurin'
java-version: '21'
-
name: Pull WOMtool Jarfile
run: wget -q https://github.com/broadinstitute/cromwell/releases/download/86/womtool-86.jar
-
name: Validate WDL Scripts
run: java -jar womtool-86.jar validate *.wdl -i *-inputs.json



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