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@ryanjameskennedy ryanjameskennedy released this 30 Aug 09:37
· 105 commits to master since this release
v0.9.0
ae423f8
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Learn about vigilant mode.

[0.9.0]

Added

  • Added long-read test data (S. aureus)
  • Added samplelist_nanopore.csv for running long-read test data
  • Added location of documentation to README
  • Added cdmDir to config
  • Added process for adding IGV annotation tracks with PRP.
  • Updated how mycobacterium_tuberculosis workflow adds IGV annotation tracks.

Fixed

  • Fixed --qc argument filepath to be full filepath to output
  • Fixed tbprofiler url in container Makefile
  • Fixed TB installation steps in main Makefile

Changed

  • Updated TbProfiler to version 6.3
  • Updated PRP to version 0.10.0
  • Removed delly annotation
  • Updated vcf args in prp module
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