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Twist_Solid v0.16.0

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@github-actions github-actions released this 24 Oct 12:21
v0.16.0
610fbe1
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Release notes v0.16.0

Only small fixes of the RNA pipeline and reference pipeline in comparison from v0.15.1

RNA pipeline

Fixed a division by zero error in the fusion report when coverage in region was unknown.
Removed extra lines per sample in the RNA MultiQC report and added the missing M aligned reads column.
The sample mixup report is now reported in percentage as it is written in the header.

Reference pipeline

Jumble PoN output name is dependent on the design file name. The output name in rule name is now automatically adjusted to what is set in the config file.
Cnvkit_batch input variables did not match that of the wrapper

Features

  • make jumble reference name based on config (64db79b)

Bug Fixes

  • add design wildcard to output (35e4514)
  • cnvkit_batch: fix input variable name to match wrapper (996891d)
  • design name as input to rule all (9c5d570)
  • jumble output is dependent on design bed name (a4fd564)
  • only use file name and not path (67c4be7)
  • report_fusion: fix div by zero (68d253a)
  • rm hardcoded jumble reference name (39e9d8f)
  • rm multiple sample lines in MultiQC_RNA (94f445f)
  • rm multiple sample lines in MultiQC_RNA (0470ecb)
  • rm multiple sample lines in MultiQC_RNA (024ebcf)
  • rm multiple sample lines in MultiQC_RNA (76f2cc8)
  • sample mixup in percentage (733ac69)
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