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tools_bisulfite_qc_coverage_stats.cwl

Travis CI User edited this page Feb 4, 2020 · 3 revisions

Documentation for bisulfite_qc_coverage_stats.cwl

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Overview

Biscuit QC: Bisulfite conversion rate.

Docker Requirement

mgibio/biscuit:0.3.8.2

Inputs

Name Label Description Type Secondary Files
vcf File
bam File
reference string
QCannotation File

Outputs

Name Label Description Type Secondary Files
bga_bed File
cov_dist File
bga_bed_dup File
dup_report File
cpg_bed File
cov_dist_cpg File
cpg_dist File
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