NF Add functions to project volume data to surface while dealing with NaNs. #291
Workflow file for this run
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name: Run tests | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- main | |
jobs: | |
run-tests: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: [3.7, 3.8, 3.9, "3.10", "3.11"] | |
max-parallel: 5 | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- uses: actions/cache@v4 | |
with: | |
path: ~/.cache/pip | |
key: ${{ runner.os }}-pip-${{ hashFiles('**/setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip- | |
- name: Install dependencies | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y inkscape | |
pip install --upgrade pip | |
pip install wheel setuptools numpy "cython<3.0" | |
# force using latest nibabel | |
pip install -U nibabel | |
pip install -e . --no-build-isolation | |
python -c 'import cortex; print(cortex.__full_version__)' | |
- name: Test with pytest | |
run: | | |
pip install -q pytest pytest-cov codecov | |
pytest --cov=./ | |
- name: Run codecov | |
run: | | |
codecov |