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Funke lab

Janelia Research Campus

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  1. gunpowder gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    Python 82 57

  2. lsd lsd Public

    🌈

    Python 54 35

  3. daisy daisy Public

    Block-wise task scheduling for large nD volumes.

    Python 30 18

  4. motile motile Public

    Multi-Object Tracker using Integer Linear Equations

    Python 30 5

  5. cellulus cellulus Public

    Unsupervised Instance Segmentation in Microscopy

    Python 23 2

  6. linajea linajea Public

    Python 18 7

Repositories

Showing 10 of 76 repositories
  • lsd Public

    🌈

    funkelab/lsd’s past year of commit activity
    Python 54 MIT 35 4 2 Updated Apr 2, 2025
  • quac Public

    Quantitative Attributions with Counterfactuals

    funkelab/quac’s past year of commit activity
    Python 2 MIT 0 22 0 Updated Apr 2, 2025
  • finn Public

    finn is (not) napari

    funkelab/finn’s past year of commit activity
    Python 3 BSD-3-Clause 1 24 2 Updated Apr 2, 2025
  • funlib.persistence Public

    Interfaces for data (arrays and graphs) and storage formats (databases and file formats)

    funkelab/funlib.persistence’s past year of commit activity
    Python 4 MIT 11 6 1 Updated Apr 2, 2025
  • motile Public

    Multi-Object Tracker using Integer Linear Equations

    funkelab/motile’s past year of commit activity
    Python 30 MIT 5 18 3 Updated Apr 1, 2025
  • gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    funkelab/gunpowder’s past year of commit activity
    Python 82 MIT 57 12 0 Updated Mar 31, 2025
  • motile_tracker Public

    An application for interactive for tracking with motile

    funkelab/motile_tracker’s past year of commit activity
    Python 7 BSD-3-Clause 4 48 1 Updated Mar 31, 2025
  • daisy Public

    Block-wise task scheduling for large nD volumes.

    funkelab/daisy’s past year of commit activity
    Python 30 MIT 18 5 0 Updated Mar 28, 2025
  • tree_view_sandbox Public

    A sandbox repo for developing a VisPy lineage tree viewer

    funkelab/tree_view_sandbox’s past year of commit activity
    Python 0 1 0 1 Updated Mar 26, 2025
  • geff Public

    Reference implementation of the Graph Exchange File Format

    funkelab/geff’s past year of commit activity
    Python 0 MIT 0 12 0 Updated Mar 26, 2025
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