Issues · frankvogt/vcf2gwas

Labels Milestones New issue

run error

#47

· Xugh1 opened

on Jul 5, 2024

vcf2gwas breaking

#46

· glaudelrio opened

on Jun 20, 2024

Unable to successfully install vcf2gwas in new conda environment - numpy dependency version problems

#45

· TobyBaril opened

on May 23, 2024

3

PLINK requires Sex Info

#44

· maxx694 opened

on May 20, 2024

Variants analysed fewer than the input VCF's SNPs

#43

· KarinaGuo opened

on Apr 30, 2024

ModuleNotFoundError: No module named 'umap'

#42

· biopelayo opened

on Apr 17, 2024

ChildProcessError

#41

· Lattesnow opened

on Mar 13, 2024

1

The process stop

#40

· nibrasissa opened

on Nov 1, 2023

Unable to install in new conda environment

#39

· jeremysutherland opened

on Aug 11, 2023

5

Can't view Manhattan and QQ-plots

#36

· TinaNeik339 opened

on Jul 13, 2023

can't update to new version v0.8.9

#35

· vinod1981 opened

on Jun 26, 2023

number of analyzed SNPs = 0

#34

· MooseyGoosey opened

on Jun 14, 2023

1

Info: No SNPs could be compared to genes, please check the species or gene file selection

#33

· jeremysutherland opened

on Jun 8, 2023

Logistic regression?

#31

· Jolleboll opened

on Jun 1, 2023

Problem installing in fresh conda environment.

#23

· Old-Green-Man opened

on Mar 17, 2023

4

Error: missing 1 required positional argument: 'dir_temp'

#21

· adrianodemarino opened

on Feb 20, 2023

4

hello, I have recently been trying to use vcf2gwas, but I have encountered the following issues. Can you please advise me on how to solve them?

#19

· zxljiqixuexi opened

on Feb 15, 2023

3

Output results folders contain blank spaces

#16

· vinod1981 opened

on Aug 3, 2022

4

error

#13

· adriludwig opened

on Jul 22, 2022

1

Specify covariates file and PCA

#12

· llniu opened

on Jun 22, 2022

6