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get_table retain well info when combining anndata #11

get_table retain well info when combining anndata

get_table retain well info when combining anndata #11

name: unit-tests
on:
push:
pull_request:
branches:
- main
workflow_dispatch:
jobs:
test:
name: ${{ matrix.platform }} py${{ matrix.python-version }}
runs-on: ${{ matrix.platform }}
strategy:
matrix:
# platform: [ubuntu-latest, windows-latest, macos-latest]
platform: [ubuntu-latest]
python-version: ['3.9', '3.11']
steps:
- name: Check out repo
uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
cache-dependency-path: "pyproject.toml"
cache: "pip"
- name: Install dependencies
shell: bash -l {0}
run: |
python -m pip install --upgrade pip
pip install pytest pytest-cov
pip install -e .
- name: Run tests
shell: bash -l {0}
run: pytest --color=yes -v --cov=./ --cov-report=xml --cov-report=term-missing
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v3
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}