Skip to content
View fethalen's full-sized avatar
21 followers · 31 following

Achievements

Achievement: StarstruckAchievement: Pull Sharkx2

Achievements

Achievement: StarstruckAchievement: Pull Sharkx2

Organizations

@Animal-Evolution-and-Biodiversity
Block or Report

Block or report fethalen

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
fethalen/README.md

Hello, I'm Felix 👋🏻

I'm a Bioinformatician at Cardio-CARE Davos in Switzerland. My research interests center around the development of novel methods for assisting in large-scale phylogenetic studies but my interests within bioinformatics are broad. Here are some of the tools that I've developed over the years.

Projects

  • Patchwork — An alignment-based program for mining phylogenetic markers from whole-genome sequencing data
  • PhyloPyPruner — Tree-based orthology inference with decontamination filters and elaborate statistics
  • Better FASTA Grep — Grep-like tool for searching and retrieving sequence records

Frequently used programming languages

Top Langs

Popular repositories Loading

  1. Patchwork Patchwork Public

    Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data

    Julia 25 3

  2. better_fasta_grep better_fasta_grep Public

    A Grep-like tool for retrieving matching sequence records from a FASTA file.

    Python 3 2

  3. phylopypruner phylopypruner Public

    Tree-based orthology inference with functionality for reducing contamination

    Python 3 1

  4. orthoquoll orthoquoll Public

    A stand-alone tool for evaluating simple statistics of orthologs

    Python 1

  5. Papaya Papaya Public

    A Visual Studio Code port of HenryNewcomer's Vim theme

  6. fethalen fethalen Public

    About me