I am a mathematician working on subjects in evolutionary and quantitative biology with a special focus on prokaryotic genome evolution.
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University of Tübingen
- www.franzbaumdicker.de
- @fbaumdicker
Highlights
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SpacerPlacer
SpacerPlacer Publicancestral reconstruction and likelihood analysis for CRISPR spacer arrays
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goldfinder
goldfinder PublicGoldfinder detects gene co-occurrence and avoidance accounting for phylogenetic relationships
Jupyter Notebook 8
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AIMsetfinder
AIMsetfinder PublicAIMsetfinder is a collection of Rscripts to identify sets of Ancestry Informative Markers (AIMs), that minimize the logloss error of a naive Bayes classifier.
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