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Merge pull request #19 from joerivandervelde/main
Finalized model for v0.2 release
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value description codesystem code iri | ||
Biological Daughter A female progeny with genetic makeup inherited from the parent. NCIT C150887 http://purl.obolibrary.org/obo/NCIT_C150887 | ||
Biological Son A male progeny with genetic makeup inherited from the parent. NCIT C150888 http://purl.obolibrary.org/obo/NCIT_C150888 | ||
Biological Maternal Grandfather A male relative who is the biological father of the biological mother. NCIT C96577 http://purl.obolibrary.org/obo/NCIT_C96577 | ||
Biological Paternal Grandfather A male relative who is the biological father of the biological father. NCIT C96583 http://purl.obolibrary.org/obo/NCIT_C96583 | ||
Biological Paternal Grandmother A female relative who is the biological mother of the biological father. NCIT C96584 http://purl.obolibrary.org/obo/NCIT_C96584 | ||
Biological Maternal Grandmother A female relative who is the biological mother of the biological mother. NCIT C96578 http://purl.obolibrary.org/obo/NCIT_C96578 | ||
Biological Maternal Cousin A relative who is the offspring of a sibling of the biological mother and thus sharing a common ancestor. NCIT C96576 http://purl.obolibrary.org/obo/NCIT_C96576 | ||
Biological Paternal Cousin A relative who is the offspring of a sibling of the biological father and thus sharing a common ancestor. NCIT C96582 http://purl.obolibrary.org/obo/NCIT_C96582 | ||
Biological Paternal Aunt A female relative who is a sibling of the biological father, and who both share a common ancestor. NCIT C96581 http://purl.obolibrary.org/obo/NCIT_C96581 | ||
Biological Maternal Aunt A female relative who is a sibling of the biological mother, and who both share a common ancestor. NCIT C96575 http://purl.obolibrary.org/obo/NCIT_C96575 | ||
Biological Father A male who contributes to the genetic makeup of his offspring through the fertilization of an ovum by his sperm. NCIT C96572 http://purl.obolibrary.org/obo/NCIT_C96572 | ||
Biological Mother A female who contributes to the genetic makeup of her offspring from the fertilization of her ovum. NCIT C96580 http://purl.obolibrary.org/obo/NCIT_C96580 | ||
Half-brother with Father as Common Parent A male sibling who shares the genetic makeup inherited from only the biological father. NCIT C96655 http://purl.obolibrary.org/obo/NCIT_C96655 | ||
Half-sister with Father as Common Parent A female sibling who shares the genetic makeup inherited from only the biological father. NCIT C96657 http://purl.obolibrary.org/obo/NCIT_C96657 | ||
Half-brother with Mother as Common Parent A male sibling who shares the genetic makeup inherited from only the biological mother. NCIT C96656 http://purl.obolibrary.org/obo/NCIT_C96656 | ||
Half-sister with Mother as Common Parent A female sibling who shares the genetic makeup inherited from only the biological mother. NCIT C96658 http://purl.obolibrary.org/obo/NCIT_C96658 | ||
Fraternal Twin Brother A male full sibling that developed from a separately fertilized ova during the same pregnancy. NCIT C165796 http://purl.obolibrary.org/obo/NCIT_C165796 | ||
Fraternal Twin Sister A female full sibling that developed from a separately fertilized ova during the same pregnancy. NCIT C165797 http://purl.obolibrary.org/obo/NCIT_C165797 | ||
Identical Twin Brother A male full sibling that developed from a shared ovum. NCIT C165848 http://purl.obolibrary.org/obo/NCIT_C165848 | ||
Identical Twin Sister A female full sibling that developed from a shared ovum. NCIT C165849 http://purl.obolibrary.org/obo/NCIT_C165849 | ||
Full Brother A male who shares with his sibling the genetic makeup inherited from both of the biological parents. NCIT C111201 http://purl.obolibrary.org/obo/NCIT_C111201 | ||
Full Sister A female who shares with her sibling the genetic makeup inherited from both of the biological parents. NCIT C111202 http://purl.obolibrary.org/obo/NCIT_C111202 | ||
Grandson A male grandchild. NCIT C71398 http://purl.obolibrary.org/obo/NCIT_C71398 | ||
Granddaughter A female grandchild. NCIT C71399 http://purl.obolibrary.org/obo/NCIT_C71399 | ||
Biological Maternal Uncle A male relative who is a sibling of the biological mother, and who both share a common ancestor. NCIT C96579 http://purl.obolibrary.org/obo/NCIT_C96579 | ||
Biological Paternal Uncle A male relative who is a sibling of the biological father, and who both share a common ancestor. NCIT C96585 http://purl.obolibrary.org/obo/NCIT_C96585 | ||
Niece A daughter of your brother or sister. NCIT C71408 http://purl.obolibrary.org/obo/NCIT_C71408 | ||
Nephew A son of your brother or sister. NCIT C71409 http://purl.obolibrary.org/obo/NCIT_C71409 | ||
Ancestor Someone from whom you are descended (but usually more remote than a grandparent). NCIT C42609 http://purl.obolibrary.org/obo/NCIT_C42609 | ||
Maternal First Cousin Once Removed A child of one's first cousin who is related by lineage through the mother's side of the family. NCIT C165851 http://purl.obolibrary.org/obo/NCIT_C165851 | ||
Paternal First Cousin Once Removed A child of one's first cousin who is related by lineage through the father's side of the family. NCIT C165852 http://purl.obolibrary.org/obo/NCIT_C165852 | ||
Descendent Someone deriving or descending from an ancestor. NCIT C42674 http://purl.obolibrary.org/obo/NCIT_C42674 | ||
Great Grandchild A child of one's grandchild. NCIT C165847 http://purl.obolibrary.org/obo/NCIT_C165847 | ||
Maternal Great Grandparent A parent of one's maternal grandparent. NCIT C166127 http://purl.obolibrary.org/obo/NCIT_C166127 | ||
Paternal Great Grandparent A parent of one's paternal grandparent. NCIT C166128 http://purl.obolibrary.org/obo/NCIT_C166128 | ||
Great Nephew A male child of one's niece or nephew. NCIT C165798 http://purl.obolibrary.org/obo/NCIT_C165798 | ||
Great Niece A female child of one's niece or nephew. NCIT C165846 http://purl.obolibrary.org/obo/NCIT_C165846 | ||
Maternal Great Aunt The aunt of one's mother. NCIT C165853 http://purl.obolibrary.org/obo/NCIT_C165853 | ||
Maternal Great Uncle The uncle of one's mother. NCIT C165854 http://purl.obolibrary.org/obo/NCIT_C165854 | ||
Paternal Great Aunt The aunt of one's father. NCIT C165856 http://purl.obolibrary.org/obo/NCIT_C165856 | ||
Paternal Great Uncle The uncle of one's father. NCIT C165857 http://purl.obolibrary.org/obo/NCIT_C165857 |
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cd ~/github/docker/molgenis/8.3/ | ||
docker-compose down | ||
docker volume prune |
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docker system prune --all --force --volumes |
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cd ~/github/docker/molgenis/8.3/ | ||
docker-compose up |
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key_ content | ||
home "<div class=""jumbotron jumbotron-fluid""> | ||
<div class=""container""> | ||
<h1 class=""display-4"" style=""color: #353535;font-size: 8.5em; ""><img src=""/logo/fair_genomes_logo_notext.png"" style=""height: 100px;""/>FAIR Genomes</h1> | ||
<h4>Version 0.2 public demo. This is a prototype for evaluation purposes only. Do not import any sensitive data.</h4> | ||
<p class=""lead""> | ||
<i>A national guideline to promote optimal (re)use of NGS data in research and healthcare</i>.<br/> | ||
</p> | ||
<table style=""table-layout: fixed; width: 700px; height: 800px;""> | ||
<tr> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_study""><img alt=""study"" src=""/logo/study.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_study"" role=""button"">Study</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_personal""><img alt=""personal"" src=""/logo/personal.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_personal"" role=""button"">Personal</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_informedconsentform""><img alt=""informedconsentform"" src=""/logo/informedconsentform.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_informedconsentform"" role=""button"">Inf. Consent Form</a> | ||
</td> | ||
</tr> | ||
<tr> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_material""><img alt=""material"" src=""/logo/material.png"" style=""width: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_material"" role=""button"">Material</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_clinical""><img alt=""clinical"" src=""/logo/clinical.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_clinical"" role=""button"">Clinical</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_individualconsent""><img alt=""individualconsent"" src=""/logo/individualconsent.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_individualconsent"" role=""button"">Individual Consent</a> | ||
</td> | ||
</tr> | ||
<tr> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_samplepreparation""><img alt=""samplepreparation"" src=""/logo/samplepreparation.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_samplepreparation"" role=""button"">Sample preparation</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_sequencing""><img alt=""sequencing"" src=""/logo/sequencing.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_sequencing"" role=""button"">Sequencing</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/dataexplorer?entity=fair-genomes_analysis""><img alt=""analysis"" src=""/logo/analysis.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-primary btn-lg"" href=""/menu/main/dataexplorer?entity=fair-genomes_analysis"" role=""button"">Analysis</a> | ||
</td> | ||
</tr> | ||
<tr> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""/menu/main/navigator/fair-genomes""><img alt=""lookups"" src=""/logo/lookups.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-warning btn-lg"" href=""/menu/main/navigator/fair-genomes"" role=""button"">Lookups</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""https://www.zonmw.nl/nl/onderzoek-resultaten/geneesmiddelen/programmas/project-detail/personalised-medicine/fair-genomes-a-national-guideline-to-promote-optimal-reuse-of-ngs-data-in-research-and-healthcare""><img alt=""info"" src=""/logo/info.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-warning btn-lg"" href=""https://www.zonmw.nl/nl/onderzoek-resultaten/geneesmiddelen/programmas/project-detail/personalised-medicine/fair-genomes-a-national-guideline-to-promote-optimal-reuse-of-ngs-data-in-research-and-healthcare"" role=""button"">Information</a> | ||
</td> | ||
<td style=""text-align: center; vertical-align: bottom; width:100px; height: 100px;""> | ||
<p><a href=""https://github.com/fairgenomes""><img alt=""contribute"" src=""/logo/contribute.png"" style=""height: 100px;""/></a></p> | ||
<a class=""btn btn-warning btn-lg"" href=""https://github.com/fairgenomes"" role=""button"">Contribute</a> | ||
</td> | ||
</tr> | ||
</table> | ||
<br/> | ||
<br/> | ||
<br/> | ||
<p style=""font-size:10px""> | ||
Figure credits: Iconathon, Adrien Coquet, Creative Stall, Anthony Bossard, Eucalyp, Sumit Saengthong, Wichai Wi, Line Icons Pro, Yu-Hsuan Chen and Anita Erica from <a href=""https://thenounproject.com/"">Noun Project</a>. | ||
</p> | ||
</div> | ||
</div>" |
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