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add episode on contact matrices#63

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amanda-minter wants to merge 31 commits intoepiverse-trace:mainepiverse-trace/tutorials-late:mainfrom amanda-minter:contact-matricesamanda-minter/tutorials-late:contact-matricesCopy head branch name to clipboard

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Commits

Commits on Oct 29, 2024

• add template for new episode

  amanda-minter

  committed
  53b99ef

• add episode to appear first

  amanda-minter

  committed
  3e986d1

• move some content between episodes

  Show description for 5babcbf
  amanda-minter

  committed
  5babcbf

• add content on SIR versus age structure SIR

  Show description for 464c9c7
  amanda-minter

  committed
  464c9c7

• add callout on how to normalise a matrix

  amanda-minter

  committed
  10e3bba

• add intro section and change headings

  amanda-minter

  committed
  872de06

• add section on socialmixr

  Show description for 575089e
  amanda-minter

  committed
  575089e

• edit and move normalisation callout

  amanda-minter

  committed
  fc398de

• add link to simulating transmission

  amanda-minter

  committed
  300fcac

• edits to text

  amanda-minter

  committed
  50f1bbe

• add list of example analyses

  amanda-minter

  committed
  2948012

• delete trailing whitespace

  amanda-minter

  committed
  3b2580a

• Apply suggestions from code review

  Show description for bc50ef5
  

  amanda-minter

  and

  sbfnk

  committed
  bc50ef5

Commits on Oct 31, 2024

• add callout on synthetic matrices

  amanda-minter

  committed
  0f8bf27

• add edits by @adamkucharski

  amanda-minter

  committed
  79b6c06

• add additional detail on normalisation

  Show description for e4cc034
  amanda-minter

  committed
  e4cc034

Commits on Nov 7, 2024

• lint file

  amanda-minter

  committed
  0971559

• add text on contact matrix conversions

  Show description for fe1c29e
  amanda-minter

  committed
  fe1c29e

• fix contact matrix notation

  Show description for 46a351c
  amanda-minter

  committed
  46a351c

• minor edit to text

  amanda-minter

  committed
  df6c1f6

• update teaching times

  amanda-minter

  committed
  6b220ff

Commits on Nov 12, 2024

• Apply suggestions from code review

  Show description for ada119a
  

  amanda-minter

  and

  adamkucharski

  authored
  ada119a

Commits on Nov 14, 2024

• update contact matrix notation

  Show description for 380dda9
  amanda-minter

  committed
  380dda9

Commits on Nov 15, 2024

• update equations for model_default in relevant episodes

  amanda-minter

  committed
  9f2b819

Commits on Nov 28, 2024

• Update episodes/contact-matrices.Rmd

  Show description for 1402f25
  

  amanda-minter

  and

  sbfnk

  authored
  1402f25

• Update contact-matrices.Rmd

  amanda-minter

  committed
  2592254

Commits on Nov 29, 2024

• add callout on splitting contact matrices using {socialmixr}

  amanda-minter

  committed
  70a6051

• Update contact-matrices.Rmd

  amanda-minter

  committed
  bf4d6bf

• add callout to simulating transmission on normalisation

  amanda-minter

  committed
  3744e27

Commits on Dec 5, 2024

• Update episodes/contact-matrices.Rmd

  Show description for 62266cb
  

  amanda-minter

  and

  sbfnk

  authored
  62266cb

• add callout on notation

  amanda-minter

  committed
  a252d00