Experimental parallelisation of Ebola model

CITATION.cff

@@ -51,6 +51,21 @@ keywords:
 - scenario-analysis
 - vaccination
 references:
+- type: software
+  title: purrr
+  abstract: 'purrr: Functional Programming Tools'
+  notes: Depends
+  url: https://purrr.tidyverse.org/
+  repository: https://CRAN.R-project.org/package=purrr
+  authors:
+  - family-names: Wickham
+    given-names: Hadley
+    email: [email protected]
+    orcid: https://orcid.org/0000-0003-4757-117X
+  - family-names: Henry
+    given-names: Lionel
+    email: [email protected]
+  year: '2024'
 - type: software
   title: checkmate
   abstract: 'checkmate: Fast and Versatile Argument Checks'
@@ -98,6 +113,20 @@ references:
     given-names: Toby
     orcid: https://orcid.org/0000-0002-3146-0865
   year: '2024'
+- type: software
+  title: furrr
+  abstract: 'furrr: Apply Mapping Functions in Parallel using Futures'
+  notes: Imports
+  url: https://furrr.futureverse.org/
+  repository: https://CRAN.R-project.org/package=furrr
+  authors:
+  - family-names: Vaughan
+    given-names: Davis
+    email: [email protected]
+  - family-names: Dancho
+    given-names: Matt
+    email: [email protected]
+  year: '2024'
 - type: software
   title: glue
   abstract: 'glue: Interpreted String Literals'
@@ -320,6 +349,18 @@ references:
     email: [email protected]
     orcid: https://orcid.org/0000-0001-8814-9421
   year: '2024'
+- type: software
+  title: future
+  abstract: 'future: Unified Parallel and Distributed Processing in R for Everyone'
+  notes: Suggests
+  url: https://future.futureverse.org
+  repository: https://CRAN.R-project.org/package=future
+  authors:
+  - family-names: Bengtsson
+    given-names: Henrik
+    email: [email protected]
+    orcid: https://orcid.org/0000-0002-7579-5165
+  year: '2024'
 - type: software
   title: ggdist
   abstract: 'ggdist: Visualizations of Distributions and Uncertainty'
@@ -382,21 +423,6 @@ references:
     email: [email protected]
     orcid: https://orcid.org/0000-0003-0645-5666
   year: '2024'
-- type: software
-  title: purrr
-  abstract: 'purrr: Functional Programming Tools'
-  notes: Suggests
-  url: https://purrr.tidyverse.org/
-  repository: https://CRAN.R-project.org/package=purrr
-  authors:
-  - family-names: Wickham
-    given-names: Hadley
-    email: [email protected]
-    orcid: https://orcid.org/0000-0003-4757-117X
-  - family-names: Henry
-    given-names: Lionel
-    email: [email protected]
-  year: '2024'
 - type: software
   title: rmarkdown
   abstract: 'rmarkdown: Dynamic Documents for R'

DESCRIPTION

@@ -28,10 +28,13 @@ License: MIT + file LICENSE
 URL: https://github.com/epiverse-trace/epidemics,
     https://epiverse-trace.github.io/epidemics/
 BugReports: https://github.com/epiverse-trace/epidemics/issues
+Depends:
+    purrr
 Imports:
     checkmate,
     cli,
     data.table,
+    furrr,
     glue,
     Rcpp,
     RcppEigen,
@@ -45,6 +48,7 @@ Suggests:
     dplyr,
     EpiEstim,
     finalsize,
+    future,
     ggdist,
     ggplot2,
     knitr,