Skip to content
@epi2me-labs

EPI2ME Labs

Bioinformatics resources from Oxford Nanopore Technologies Plc

Pinned Loading

  1. kraken2-server Public

    Kraken2 Server

    C++ 21 4

  2. wf-transcriptomes Public

    Nextflow 91 36

  3. wf-single-cell Public

    Python 86 43

  4. wf-bacterial-genomes Public

    Small variant calling for haploid samples

    Python 34 19

  5. wf-human-variation Public

    Nextflow 120 60

  6. fastcat Public

    Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.

    C 36 4

Repositories

Showing 10 of 35 repositories
  • epi2me-labs.github.io Public
    HTML 8 2 0 0 Updated Apr 16, 2025
  • wf-single-cell Public
    Python 86 43 15 0 Updated Apr 16, 2025
  • wf-flu Public
    Nextflow 17 5 2 0 Updated Apr 16, 2025
  • wf-transcriptomes Public
    Nextflow 91 36 16 1 Updated Apr 16, 2025
  • wf-basecalling Public
    Nextflow 39 20 17 1 Updated Apr 15, 2025
  • wf-amplicon Public
    Python 31 9 4 0 Updated Apr 14, 2025
  • wf-16s Public
    Nextflow 29 5 3 0 Updated Apr 14, 2025
  • wf-clone-validation Public
    Python 32 22 5 1 Updated Apr 14, 2025
  • wf-metagenomics Public

    Metagenomic classification of long-read sequencing data

    Python 81 25 1 0 Updated Apr 11, 2025
  • wf-template Public

    Nextflow workflow template repository

    Python 18 33 1 0 Updated Apr 9, 2025
View all repositories