Change folder structure and Actions (#33)

ecell · Oct 13, 2022 · fafcf42 · fafcf42
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Showing 21 changed files with 163,150 additions and 5 deletions.
diff --git a/.github/workflows/makefile.yml b/.github/workflows/makefile.yml
diff --git a/scripts/CHEBI.py → CHEBI/CHEBI.py b/scripts/CHEBI.py → CHEBI/CHEBI.py
diff --git a/scripts/bigg.metabolite.py → bigg.metabolite/bigg.metabolite.py b/scripts/bigg.metabolite.py → bigg.metabolite/bigg.metabolite.py
diff --git a/scripts/bigg.reaction.py → bigg.reaction/bigg.reaction.py b/scripts/bigg.reaction.py → bigg.reaction/bigg.reaction.py
diff --git a/data/biocyc/LICENSE → biocyc/LICENSE b/data/biocyc/LICENSE → biocyc/LICENSE
diff --git a/scripts/biocyc.py → biocyc/biocyc.py b/scripts/biocyc.py → biocyc/biocyc.py
diff --git a/data/biocyc/biopax-level3.owl → biocyc/biopax-level3.owl b/data/biocyc/biopax-level3.owl → biocyc/biopax-level3.owl
diff --git a/data/brenda/LICENSE → brenda/LICENSE b/data/brenda/LICENSE → brenda/LICENSE
diff --git a/scripts/brenda.py → brenda/brenda.py b/scripts/brenda.py → brenda/brenda.py
diff --git a/data/brenda/brenda_2022_2.json.tar.gz → brenda/brenda_2022_2.json.tar.gz b/data/brenda/brenda_2022_2.json.tar.gz → brenda/brenda_2022_2.json.tar.gz
diff --git a/data/kegg.drug/LICENSE → kegg.drug/LICENSE b/data/kegg.drug/LICENSE → kegg.drug/LICENSE
diff --git a/data/kegg.drug/drug → kegg.drug/drug b/data/kegg.drug/drug → kegg.drug/drug
diff --git a/data/metacyc.compound/LICENSE → metacyc.compound/LICENSE b/data/metacyc.compound/LICENSE → metacyc.compound/LICENSE
diff --git a/data/metacyc.reaction/LICENSE → metacyc.reaction/LICENSE b/data/metacyc.reaction/LICENSE → metacyc.reaction/LICENSE
diff --git a/scripts/metanetx.reaction.py → metanetx.reaction/metanetx.reaction.py b/scripts/metanetx.reaction.py → metanetx.reaction/metanetx.reaction.py
diff --git a/scripts/pubchem.compound.py → pubchem.compound/pubchem.compound.py b/scripts/pubchem.compound.py → pubchem.compound/pubchem.compound.py
diff --git a/pubchem.compound/refmet.csv b/pubchem.compound/refmet.csv
diff --git a/scripts/rhea.py → rhea/rhea.py b/scripts/rhea.py → rhea/rhea.py
diff --git a/scripts/Makefile b/scripts/Makefile
diff --git a/scripts/uniprot.py → uniprot/uniprot.py b/scripts/uniprot.py → uniprot/uniprot.py
diff --git a/scripts/wgetdata.sh → wgetdata.sh b/scripts/wgetdata.sh → wgetdata.sh