Update GitHub Actions (#37)

* add header=False * Update createid2id.yml
ecell · Nov 22, 2022 · aed9cec · aed9cec
1 parent 950af3f
commit aed9cec
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Showing 2 changed files with 6 additions and 1 deletion.
diff --git a/.github/workflows/createid2id.yml b/.github/workflows/createid2id.yml
@@ -38,6 +38,11 @@ jobs:
       run: |
         cat CHEBI/CHEBI.tsv bigg.metabolite/bigg.metabolite.tsv bigg.reaction/bigg.reaction.tsv biocyc/biocyc.tsv brenda/brenda.tsv metanetx.reaction/metanetx.reaction.tsv rhea/rhea.tsv uniprot/uniprot.tsv > id2id.tsv
         ls -lh id2id.tsv
+    - name: Update release
+      uses: johnwbyrd/update-release@v1
+      with:
+        token: ${{ secrets.GITHUB_TOKEN }}
+        files: ./id2id.tsv
     - uses: actions/upload-artifact@v3
       with:
         name: my-artifact

diff --git a/bigg.metabolite/bigg.metabolite.py b/bigg.metabolite/bigg.metabolite.py
@@ -6,4 +6,4 @@
 df3 = df2['database_links'].str.split('/', expand=True)
 result = pd.DataFrame({'id1': df2['universal_bigg_id'], 'identifiersorgprefix2': df3[3], 'id2': df3[4]})
 result['identifiersorgprefix1'] = 'bigg.metabolite'
-result[['identifiersorgprefix1', 'id1', 'identifiersorgprefix2', 'id2']].to_csv('bigg.metabolite.tsv', index=False, sep="\t")
+result[['identifiersorgprefix1', 'id1', 'identifiersorgprefix2', 'id2']].to_csv('bigg.metabolite.tsv', header=False, index=False, sep="\t")