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@eQTL-Catalogue

eQTL Catalogue

eQTL Catalogue development team

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  1. qtlmap qtlmap Public

    Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue

    Nextflow 47 14

  2. genimpute genimpute Public

    Portable genotype imputation pipeline used by the eQTL Catalogue

    Nextflow 5 2

  3. qcnorm qcnorm Public

    This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes

    Nextflow 5 4

  4. rnaseq rnaseq Public

    RNA-seq quantification pipeline used by the eQTL Catalogue

    Nextflow 8 7

  5. eQTL-Catalogue-resources eQTL-Catalogue-resources Public

    HTML 46 36

Repositories

Showing 10 of 13 repositories
  • eQTL-SumStats Public

    eQTL Catalogue Summary Statistics

    eQTL-Catalogue/eQTL-SumStats’s past year of commit activity
    Python 3 1 8 13 Updated Apr 8, 2025
  • qtlmap Public

    Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue

    eQTL-Catalogue/qtlmap’s past year of commit activity
    Nextflow 47 MIT 14 7 0 Updated Mar 25, 2025
  • eQTL-Catalogue-website Public Forked from ebiwd/EBI-Boilerplate-Jekyll

    Get up and running with EBI-themed Jekyll fast (rolled with gh-pages in mind, clone/fork suggested)

    eQTL-Catalogue/eQTL-Catalogue-website’s past year of commit activity
    HTML 1 8 0 0 Updated Feb 1, 2025
  • rnaseq Public

    RNA-seq quantification pipeline used by the eQTL Catalogue

    eQTL-Catalogue/rnaseq’s past year of commit activity
    Nextflow 8 MIT 7 0 1 Updated Dec 9, 2024
  • eQTL-Catalogue-resources Public
    eQTL-Catalogue/eQTL-Catalogue-resources’s past year of commit activity
    HTML 46 36 1 2 Updated Oct 30, 2024
  • qcnorm Public

    This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes

    eQTL-Catalogue/qcnorm’s past year of commit activity
    Nextflow 5 MIT 4 3 0 Updated Jan 15, 2024
  • genimpute Public

    Portable genotype imputation pipeline used by the eQTL Catalogue

    eQTL-Catalogue/genimpute’s past year of commit activity
    Nextflow 5 Apache-2.0 2 0 0 Updated Jan 3, 2024
  • federated-analysis Public
    eQTL-Catalogue/federated-analysis’s past year of commit activity
    Python 0 0 0 0 Updated May 26, 2022
  • genotype_qc Public archive

    Workflows for performing genotype QC before and after imputation

    eQTL-Catalogue/genotype_qc’s past year of commit activity
    Nextflow 4 Apache-2.0 0 0 0 Updated Dec 17, 2021
  • susie-workflow Public archive

    Nextflow workflow for applying SuSiE finemapping model to a large number of molecular QTLs

    eQTL-Catalogue/susie-workflow’s past year of commit activity
    R 8 Apache-2.0 3 0 0 Updated Dec 17, 2021
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