Framework for 3D Bone Marrow Segmentation on 18F-FDG PET/CT Images

Class Project for CS 766: Computer Vision

Development of MATLAB analysis tools for segmenting the bone marrow compartment of clinical 18F-FDG PET/CT scans.

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Code can be found in matlab/ - see matlab/README for running procedure

Proposal, midpoint report, and final report can be found in the repo wiki. Copies of these documents, plus the final presentation slides, can be found in doc/

Result images are in images/

Due to data sharing restrictions, I cannot make available my raw input data. However, some publicly available PET/CT dicom data can be found on The Cancer Imaging Archive - for example: https://wiki.cancerimagingarchive.net/display/Public/Soft-tissue-Sarcoma

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Daniel Huff

CS 766: Computer Vision, Spring 2018

Dept of Medical Physics

University of Wisconsin-Madison

Contact: [email protected]

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