Zero-inflated Negative Binomial based Wanted Variation Extraction (ZINB-WaVE)
This package implements a zero-inflated negative binomial model for single-cell RNA-seq data, with latent factors.
The model is described in details in the paper:
Since Bioconductor 3.7 the new recommended way to install Bioconductor packages is via the BiocManager package, available on CRAN:
install.packages("BiocManager")
BiocManager::install("zinbwave")
Note that zinbwave requires R (>=3.4) and Bioconductor (>=3.6).
In virtually all cases, installing from Bioconductor is recommended. However, if you want to install the development version of zinbwave from GitHub, you can do so with the following.
library(devtools)
install_github("drisso/zinbwave")