Releases: dockstore/dockstore-cli
Releases · dockstore/dockstore-cli
1.18.0
What's Changed
- Bump org.apache.httpcomponents.client5:httpclient5 from 5.4.1 to 5.4.3 in /dockstore-client/generated/src/main/resources by @dependabot[bot] in #307
- simple password vault integration based on psql suggestion by @denis-yuen in #308
- key update from webservice by @denis-yuen in #309
- Fix nightly CLI build by @kathy-t in #310
- Bump org.apache.commons:commons-lang3 from 3.17.0 to 3.18.0 in /dockstore-client/generated/src/main/resources by @dependabot[bot] in #311
- redirect broad artifacts by @denis-yuen in #312
- Add note on token option by @denis-yuen in #313
Full Changelog: 1.17.0...1.18.0
1.17.0
What's Changed
- fix develop nightly builds by @denis-yuen in #297
- allow nightly builds to ignore artifact uploads from feature branches by @denis-yuen in #299
- update toil and resurrect tests by @denis-yuen in #300
- Use reusable deploy artifacts workflow by @kathy-t in #298
- Compatible with (but not mandatory) Java 21 by @denis-yuen in #293
- update keylist by @denis-yuen in #302
- prep for dropwizard update in develop by @denis-yuen in #303
- core update to 1.17.0-alpha.2 by @denis-yuen in #304
- Bump org.apache.commons:commons-vfs2 from 2.9.0 to 2.10.0 in /dockstore-client by @dependabot in #305
Full Changelog: 1.16.0...1.17.0
1.16.0
release process
1.15.1
1.15.0
See https://github.com/dockstore/dockstore/releases/tag/1.15.0 for a human-readable summary
What's Changed
- Ensuring that Dockstore Yaml Validate Rejects .dockstore.yml files that are missing or have an empty primaryDescriptorPath by @fhembroff in #235
- dropwizard 4 update by @denis-yuen in #238
- replace expired docker image by @denis-yuen in #240
- rename reports to avoid clash by @denis-yuen in #242
- add github actions for release by @denis-yuen in #241
- Remove wes checks that are never executed by @kathy-t in #245
- add auto deploy for testing by @denis-yuen in #246
- fix cron build by @denis-yuen in #247
- Remove swagger client in favour of openapi client by @denis-yuen in #249
- Check license file via GitHub action by @coverbeck in #250
- new broad artifactory location by @denis-yuen in #251
- DOCK-2323: Log source and destination paths for file provisioning by @hyunnaye in #252
- bom update by @denis-yuen in #254
- fix cron build by @denis-yuen in #253
- Re-enable failing CLI Test by @coverbeck in #256
- add broad mirror by @denis-yuen in #258
- update dockstore version by @denis-yuen in #260
- Bump actions/checkout from 3 to 4 by @dependabot in #257
- DOCK-2262: invalidates relative path yml files by @hyunnaye in #255
- update to latest 1.15 alpha by @denis-yuen in #261
- need this for failing cron with current develop by @denis-yuen in #263
- Bump actions/setup-java from 3 to 4 by @dependabot in #267
- finish deprecation of author in favour of authors array by @denis-yuen in #269
- cwlavro update (#271) by @denis-yuen in #273
- test core update by @denis-yuen in #275
Full Changelog: 1.14.0...1.15.0
1.15.0-beta.0
testing out release process
1.14.0
What's Changed
- Update PR template for docs by @denis-yuen in #187
- Add review instructions by @coverbeck in #199
- Use new cromwell version by @kathy-t in #201
- clear out a few dependencies by @denis-yuen in #205
- reduce pin by @denis-yuen in #206
- assign reviewers for dependabot by @denis-yuen in #207
- SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
- switch to github lgtm by @denis-yuen in #208
- SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
- Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
- java 17 and compile issue with trs api by @denis-yuen in #211
- Update template with security section by @coverbeck in #212
- rotate bundle by @denis-yuen in #213
- Deleted the zip file once it is unzipped. by @fhembroff in #216
- Added a ToilCompatibleTest class to CLI by @fhembroff in #215
- DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
- webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
- Feature/junit5 by @denis-yuen in #214
- update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
- Display server-url by @KimberleyChong in #220
- Feature/bom update - test optimization by @denis-yuen in #223
- Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
- Made error messages in CLI more user friendly by @fhembroff in #222
- Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
- SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
- Fix Incorrect WDL validation by @fhembroff in #225
- CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
- Corrected Typos found in CLI by @fhembroff in #227
- bom update by @denis-yuen in #228
- Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
- update docker compose by @denis-yuen in #230
- Moved CWL and WDL to constants by @fhembroff in #232
- Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
- Feature/dock 2353/hello world workflow fails by @fhembroff in #236
- DOCK-2349: added error handling message for CWL JSON conversion by @hyunnaye in #237
New Contributors
- @hyunnaye made their first contribution in #204
- @KimberleyChong made their first contribution in #220
Full Changelog: 1.13.1...1.14.0
1.14.0-rc.0
What's Changed
- Update PR template for docs by @denis-yuen in #187
- Add review instructions by @coverbeck in #199
- Use new cromwell version by @kathy-t in #201
- clear out a few dependencies by @denis-yuen in #205
- reduce pin by @denis-yuen in #206
- assign reviewers for dependabot by @denis-yuen in #207
- SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
- switch to github lgtm by @denis-yuen in #208
- SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
- Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
- java 17 and compile issue with trs api by @denis-yuen in #211
- Update template with security section by @coverbeck in #212
- rotate bundle by @denis-yuen in #213
- Deleted the zip file once it is unzipped. by @fhembroff in #216
- Added a ToilCompatibleTest class to CLI by @fhembroff in #215
- DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
- webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
- Feature/junit5 by @denis-yuen in #214
- update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
- Display server-url by @KimberleyChong in #220
- Feature/bom update - test optimization by @denis-yuen in #223
- Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
- Made error messages in CLI more user friendly by @fhembroff in #222
- Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
- SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
- Fix Incorrect WDL validation by @fhembroff in #225
- CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
- Corrected Typos found in CLI by @fhembroff in #227
- bom update by @denis-yuen in #228
- Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
- update docker compose by @denis-yuen in #230
- Moved CWL and WDL to constants by @fhembroff in #232
- Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
- Feature/dock 2353/hello world workflow fails by @fhembroff in #236
- DOCK-2349: added error handling message for CWL JSON conversion by @hyunnaye in #237
New Contributors
- @hyunnaye made their first contribution in #204
- @KimberleyChong made their first contribution in #220
Full Changelog: 1.13.1...1.14.0-rc.0
1.14.0-beta.0
What's Changed
- Update PR template for docs by @denis-yuen in #187
- Add review instructions by @coverbeck in #199
- Use new cromwell version by @kathy-t in #201
- clear out a few dependencies by @denis-yuen in #205
- reduce pin by @denis-yuen in #206
- assign reviewers for dependabot by @denis-yuen in #207
- SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
- switch to github lgtm by @denis-yuen in #208
- SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
- Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
- java 17 and compile issue with trs api by @denis-yuen in #211
- Update template with security section by @coverbeck in #212
- rotate bundle by @denis-yuen in #213
- Deleted the zip file once it is unzipped. by @fhembroff in #216
- Added a ToilCompatibleTest class to CLI by @fhembroff in #215
- DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
- webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
- Feature/junit5 by @denis-yuen in #214
- update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
- Display server-url by @KimberleyChong in #220
- Feature/bom update - test optimization by @denis-yuen in #223
- Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
- Made error messages in CLI more user friendly by @fhembroff in #222
- Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
- SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
- Fix Incorrect WDL validation by @fhembroff in #225
- CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
- Corrected Typos found in CLI by @fhembroff in #227
- bom update by @denis-yuen in #228
- Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
- update docker compose by @denis-yuen in #230
- Moved CWL and WDL to constants by @fhembroff in #232
- Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
New Contributors
- @hyunnaye made their first contribution in #204
- @KimberleyChong made their first contribution in #220
Full Changelog: 1.13.1...1.14.0-beta.0