fix typo #388
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| # Workflow is based on the Astropy GitHub actions workflow, ci_workflows.yml | |
| name: CI | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| tags: | |
| - '*' | |
| pull_request: | |
| # 2025-01-07 | |
| # NERSC has Python 3.10, Numpy 1.22.4, Scipy 1.8.1, matplotlib 3.8.4, astropy 6.0.1, healpy 1.16.6, PyYAML 6.0.1 | |
| # PyPI has Python 3.13, Numpy 2.2.1, Scipy 1.15.0, matplotlib 3.10.0, astropy 7.0.0, healpy 1.18.0, PyYAML 6.0.2 | |
| # Numpy 1.26.4 was the last pre-2.0 Numpy. | |
| # | |
| jobs: | |
| tests: | |
| name: Unit tests | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10', '3.11', '3.12', '3.13'] | |
| numpy-version: ['<1.23', '<1.24', '<2.0', '<2.1', '<2.2', '<3'] | |
| astropy-version: ['<6.1', '<7.0', '<7.1'] | |
| exclude: | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<1.24' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<2.0' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<2.1' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<2.2' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<3' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<1.23' | |
| astropy-version: '<7.1' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<1.24' | |
| astropy-version: '<7.1' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<2.0' | |
| astropy-version: '<7.1' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<2.1' | |
| astropy-version: '<7.1' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<2.2' | |
| astropy-version: '<7.1' | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| numpy-version: '<3' | |
| astropy-version: '<7.1' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<1.23' | |
| astropy-version: '<6.1' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<1.24' | |
| astropy-version: '<6.1' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<2.0' | |
| astropy-version: '<6.1' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<2.1' | |
| astropy-version: '<6.1' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<2.2' | |
| astropy-version: '<6.1' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<1.23' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<1.24' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<2.0' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<2.1' | |
| astropy-version: '<7.0' | |
| - os: ubuntu-latest | |
| python-version: '3.13' | |
| numpy-version: '<2.2' | |
| astropy-version: '<7.0' | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install --upgrade --upgrade-strategy only-if-needed "numpy${{ matrix.numpy-version }}" | |
| python -m pip install --upgrade --upgrade-strategy only-if-needed "astropy${{ matrix.astropy-version }}" | |
| python -m pip install --editable .[test] | |
| - name: Run the test | |
| run: pytest | |
| coverage: | |
| name: Test coverage | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10'] | |
| numpy-version: ['<1.23'] | |
| astropy-version: ['<6.1'] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install --upgrade --upgrade-strategy only-if-needed "numpy${{ matrix.numpy-version }}" | |
| python -m pip install --upgrade --upgrade-strategy only-if-needed "astropy${{ matrix.astropy-version }}" | |
| python -m pip install --editable .[coverage] | |
| - name: Run the test with coverage | |
| run: pytest --cov | |
| - name: Coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} | |
| run: coveralls | |
| docs: | |
| name: Doc test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10'] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: python -m pip install --upgrade pip setuptools wheel Sphinx sphinx-rtd-theme | |
| - name: Test the documentation | |
| run: sphinx-build -W --keep-going -b html doc doc/_build/html | |
| api: | |
| name: API doc completeness test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10'] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install --editable . | |
| - name: Generate api.rst | |
| run: ./bin/desi_api_file --api ./api.rst desiutil | |
| - name: Compare generated api.rst to checked-in version | |
| run: diff --ignore-space-change --ignore-blank-lines ./api.rst ./doc/api.rst | |
| scripts: | |
| name: Script definition completeness test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: | |
| - ubuntu-latest | |
| python-version: | |
| - '3.13' | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Compare contents of bin/ to options.scripts in setup.cfg | |
| run: python -c 'import os; import sys; from configparser import ConfigParser; conf = ConfigParser(); foo = conf.read(["setup.cfg"]); scripts = [os.path.basename(s) for s in conf["options"]["scripts"].strip().split("\n")]; sys.exit(int(set(os.listdir("bin")) != set(scripts)))' | |
| style: | |
| name: Style check | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10'] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: python -m pip install --upgrade pip setuptools wheel pycodestyle | |
| - name: Test the style; failures are allowed | |
| # This is equivalent to an allowed falure. | |
| # continue-on-error: true | |
| run: pycodestyle --count py/desiutil |