…vis hooks, remove raincloud plot (#293)

Co-authored-by: Daniela <[email protected]>
Co-authored-by: Christian Bors <[email protected]>
Co-authored-by: Holger Stitz <[email protected]>

* fixed hexbin plot

* unify plotaxis

* fixed lasso

* hexbinplot: refactor labels, colors, axis

rafactor axis label color, position
refactor tick label, color
hide border
refactor selection colors (gray when not selected)

* moved useZoom

* changed opacity scale

* introduce color and size variables

* align axis / labels / legends / icons of heatmap

* small heatmap improvements

* selection colors

* fix label

* remove raincloud plot

* use selection and grid colors

* use correct color

* added legend to bar chart

* fix sort icons in barchart

* barchart: grid color

* use rem everywhere

* add sort icon component

* add priority sort, fix spacing, change default sort of heatmap to none

* rotat categorical x-labels when too long in barchart

* rotate labels

* fix barchart axis rotation

* fix x-label overflow

* show error message if vis type is not selected

* fix initial label cut off in barchart

* hide grid lines in bar chart

* fix barchart sorting

* align colors across vis types

* unify unknown labels

* fix legend height

* update imports and delete constants.tsx

* manage hexbin selection colors

* barchart: always consider legend height

* unify behaviour of selections

* rename variable name

* use one color scale for hexbin plot

* implement proper grouping and strip overlay

* fix: heatmap hover

* fix: selecting the same vis type twice

* remove test vis type from main

* change null label to unknown

* improve violin style

* improve selection

* hexbin plot: assign gray color to undefined or null values

* add possibility to sync yaxis

* add possibility to truncate from the middle

* barchart: assign gray color to undefined or null values; fix tooltip labels if undefined

* add sort logic

* assign default color to unknown categories

* hexbin plot: deactivate legend interactiknos

* add legend group title

* add category name to hoverinfo

* refactor: reuse existing selection color variable

* docs: add comments to constants

* refactor: cast to string

* some layout improvements

* add breast cancer dataset

* refactor: remove orphan code

* refactor: cast to string

* docs: convert comment to function comment

* fix: remove unused mantine theme from sankey vis

* sort icon and sort logic improvements

* small sorting fix

* add generic plotly sort icon create function

* apply review feedback

* refactor: remove groupedIds

* add compact mode for sort icon

* add sort icon for xaxis

* switch to breatCancer data set in demo app

* use neutral color for NAN_REPLACEMENT

* move files

* rename: I to identityMatrix

* rename I functions

* rename files

* some minor improvements

* add constant for traces color

- remove unused vectorv3 file

* reduce grid spacing

* fix pointpos

* do not add sub  category for y-value null

* set plotly legends to be enabled and disable legend click events

* add dummy violin halfs

* improve grid layout

* pass separate categoryOrder array per subplot

* add gene test data

* remove gene test data

* fix wrong axis type

* add check for undefined data

---------

Co-authored-by: Moritz Heckmann <[email protected]>
Co-authored-by: Daniela <[email protected]>
Co-authored-by: Christian Bors <[email protected]>
Co-authored-by: Holger Stitz <[email protected]>

* fixed hexbin plot

* unify plotaxis

* fixed lasso

* hexbinplot: refactor labels, colors, axis

rafactor axis label color, position
refactor tick label, color
hide border
refactor selection colors (gray when not selected)

* moved useZoom

* changed opacity scale

* introduce color and size variables

* align axis / labels / legends / icons of heatmap

* small heatmap improvements

* selection colors

* fix label

* remove raincloud plot

* use selection and grid colors

* use correct color

* added legend to bar chart

* fix sort icons in barchart

* barchart: grid color

* use rem everywhere

* feat: add boxplot vis

* add sort icon component

* add priority sort, fix spacing, change default sort of heatmap to none

* rotat categorical x-labels when too long in barchart

* rotate labels

* fix barchart axis rotation

* fix x-label overflow

* show error message if vis type is not selected

* fix initial label cut off in barchart

* hide grid lines in bar chart

* fix barchart sorting

* align colors across vis types

* unify unknown labels

* fix legend height

* update imports and delete constants.tsx

* manage hexbin selection colors

* barchart: always consider legend height

* unify behaviour of selections

* rename variable name

* use one color scale for hexbin plot

* implement proper grouping and strip overlay

* fix: heatmap hover

* fix: selecting the same vis type twice

* remove test vis type from main

* change null label to unknown

* improve violin style

* improve selection

* hexbin plot: assign gray color to undefined or null values

* add possibility to sync yaxis

* add possibility to truncate from the middle

* barchart: assign gray color to undefined or null values; fix tooltip labels if undefined

* add sort logic

* assign default color to unknown categories

* hexbin plot: deactivate legend interactiknos

* add legend group title

* add category name to hoverinfo

* refactor: reuse existing selection color variable

* docs: add comments to constants

* refactor: cast to string

* some layout improvements

* add breast cancer dataset

* refactor: remove orphan code

* refactor: cast to string

* docs: convert comment to function comment

* fix: remove unused mantine theme from sankey vis

* sort icon and sort logic improvements

* small sorting fix

* add generic plotly sort icon create function

* apply review feedback

* refactor: remove groupedIds

* add compact mode for sort icon

* add sort icon for xaxis

* switch to breatCancer data set in demo app

* use neutral color for NAN_REPLACEMENT

* move files

* rename: I to identityMatrix

* rename I functions

* rename files

* some minor improvements

* add constant for traces color

- remove unused vectorv3 file

* reduce grid spacing

* fix pointpos

* do not add sub  category for y-value null

* set plotly legends to be enabled and disable legend click events

* add dummy violin halfs

* improve grid layout

* pass separate categoryOrder array per subplot

* boxplot specific changes to violin vis

* add generic violinBoxMergeDefaultConfig

* ensure valid overlay config

---------

Co-authored-by: Moritz Heckmann <[email protected]>
Co-authored-by: Daniela <[email protected]>
Co-authored-by: Christian Bors <[email protected]>
Co-authored-by: dvmartinweigl <[email protected]>
Co-authored-by: Holger Stitz <[email protected]>

* feat: upgrade backend deps to latest version (20240611)

* update all frontend deps

* deps(npm): [email protected]

* deps(npm): [email protected]

---------

Co-authored-by: Holger Stitz <[email protected]>

Co-authored-by: Holger Stitz <[email protected]>

* feat: add BlurredOverlay component

* feat: replace tdp-busy w/ BlurredOverlay in proxy view component

* test: add storybook story for proxy view component

* test: improve ProxyViewComponent story

* test: add BlurredOverlay story

---------

Co-authored-by: Michael Pühringer <[email protected]>

* export vis color and fix y-axis label

* Update chromatic.yml

* Update chromatic.yml

* Update chromatic.yml

* Update chromatic.yml

* export sort icon

* add fixed date to utils story

* Update build.yml

* Delete .github/workflows/chromatic.yml

---------

Co-authored-by: Michael Pühringer <[email protected]>