Merge pull request #226 from datacarpentry/znk/update/packages #29
ytakemonAnnotations
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episodes/00-introduction.Rmd#L54
[link text too short]: [R](https://en.wikipedia.org/wiki/R_(programming_language))
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episodes/00-introduction.Rmd#L343
[uninformative link text]: [here](https://cran.r-project.org/package=here)
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episodes/01-r-basics.Rmd#L57
[uninformative link text]: [here](https://www.r-bloggers.com/r-tutorial-on-the-apply-family-of-functions/)
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episodes/03-basics-factors-dataframes.Rmd#L682
[uninformative link text]: [here](https://swcarpentry.github.io/r-novice-inflammation/15-supp-loops-in-depth/)
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episodes/04-bioconductor-vcfr.Rmd#L80
[uninformative link text]: [here](https://www.bioconductor.org/install/)
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episodes/07-r-help.Rmd#L48
[link text too short]: [r](https://stackoverflow.com/questions/tagged/r)
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learners/setup.md#L95
[uninformative link text]: [Link](https://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/)
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learners/setup.md#L96
[uninformative link text]: [Link](https://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/TrimmomaticManual_V0.32.pdf)
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learners/setup.md#L97
[uninformative link text]: [Link](https://bio-bwa.sourceforge.net/bwa.shtml)
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learners/setup.md#L98
[uninformative link text]: [Link](https://www.htslib.org/doc/samtools.html)
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