Validate task view #90
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| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| paths: | |
| - '.github/workflows/validate-ctv.yml' | |
| - 'Phylogenetics.md' | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| paths: | |
| - '.github/workflows/validate-ctv.yml' | |
| - 'Phylogenetics.md' | |
| schedule: | |
| - cron: '30 5 1 * *' | |
| name: Validate task view | |
| jobs: | |
| validate-ctv: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| - name: Install apt packages (Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get install libcurl4-openssl-dev | |
| shell: bash | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Cache R packages | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
| - name: Install R packages | |
| run: | | |
| install.packages("ctv") | |
| install.packages("knitr") | |
| install.packages("rmarkdown") | |
| install.packages("RCurl") | |
| shell: Rscript {0} | |
| - name: ctv2html | |
| run: | | |
| ctv::ctv2html(paste0(basename(getwd()), ".md")) | |
| shell: Rscript {0} | |
| - name: check_ctv_packages | |
| run: | | |
| result <- ctv::check_ctv_packages(paste0(basename(getwd()), ".md")) | |
| exceptArchive <- result[-4] | |
| failures <- lengths(exceptArchive) > 0 | |
| if (any(failures)) { | |
| print(result[failures]) | |
| message("\n\n\n\n") # "Stop" command sometimes appears early | |
| stop("See errors identified above") | |
| } | |
| archived <- result[[4]] | |
| if (length(archived)) { | |
| if ("${{ github.event_name }}" != "pull_request") { | |
| stop( | |
| "Archived packages in packagelist:\n - ", | |
| paste0(archived, collapse = "\n - ") | |
| ) | |
| } else { | |
| previousArchive <- ctv::check_ctv_packages( | |
| paste0("https://raw.githubusercontent.com/cran-task-views/", | |
| basename(getwd()), "/main/", basename(getwd()), ".md" | |
| ))[["Packages in packagelist but archived on CRAN"]] | |
| newArchives <- setdiff(archived, previousArchive) | |
| if (length(newArchives)) { | |
| stop( | |
| "Adding archived packages:\n - ", | |
| paste0(newArchives, collapse = "\n - ") | |
| ) | |
| } | |
| } | |
| } | |
| shell: Rscript {0} | |
| - name: check other links | |
| if: success() || failure() | |
| run: | | |
| links <- ctv::read.ctv(paste0(basename(getwd()), ".md"))$otherlinks | |
| urls <- sub(".*href=\"(.*)\".*", "\\1", links) | |
| ok <- RCurl::url.exists(urls) | |
| if (any(!ok)) { | |
| message(paste0("::warning file=", basename(getwd()), ".md::Inoperational links")) | |
| stop("URLs did not return OK status:\n - ", | |
| paste0(names(ok)[!ok], collapse = "\n - ") | |
| ) | |
| } | |
| shell: Rscript {0} |