Update Log

Now incorporate the --id-delim parameter which might be useful for BGEN input. You can change the delimitor between the FID and IID information according to your BGEN file (NOTE: If you don't have the FID, and the BGEN file contain both the FID and IID, this will not help. You will need a proper sample file or a phenotype file with both the FID and IID information)
--memory parameter should now work for both c++ and Rscript
(Ghost Edit: Recompiled the Linux executable for it to work on other machines)

Side Note:

2.1.10 contains some of the fix for --id-delim but didn't seems to solve the problem. Therefore I don't make a release for it.
I have now moved to Mount Sinai in New York, thus support will now follow the EDT