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libyear API endpoint added
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Signed-off-by: Sean P. Goggins <[email protected]>
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sgoggins committed Sep 24, 2024
1 parent 7546a68 commit ef39e84
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158 changes: 158 additions & 0 deletions augur/api/metrics/deps.py
Original file line number Diff line number Diff line change
Expand Up @@ -77,4 +77,162 @@ def deps(repo_group_id, repo_id=None, period='day', begin_date=None, end_date=No
return results


@register_metric()
def libyear(repo_group_id, repo_id=None, period='day', begin_date=None, end_date=None):
"""
Returns a list of all the dependencies in a project/repo/repo_group.
:param repo_id: The repository's id
:param repo_group_id: The repository's group id
:param period: To set the periodicity to 'day', 'week', 'month' or 'year', defaults to 'day'
:param begin_date: Specifies the begin date, defaults to '1970-1-1 00:00:00'
:param end_date: Specifies the end date, defaults to datetime.now()
:return: DataFrame of persons/period
"""

if not begin_date:
begin_date = '1970-1-1 00:00:01'
if not end_date:
end_date = datetime.datetime.now().strftime('%Y-%m-%d %H:%M:%S')

if repo_id:

libyearSQL = s.sql.text("""
SELECT
rg_name,
repo_group_id,
repo_name,
d.repo_id,
repo_git,
forked_from,
repo_archived,
c.name,
c.libyear,
MAX ( C.data_collection_date ) AS most_recent_collection
FROM
(
SELECT A.rg_name AS rg_name,
A.repo_group_id AS repo_group_id,
b.repo_name AS repo_name,
b.repo_id AS repo_id,
b.repo_git AS repo_git,
b.forked_from AS forked_from,
b.repo_archived AS repo_archived
FROM
repo_groups A,
repo b
WHERE
A.repo_group_id = b.repo_group_id
ORDER BY
rg_name,
repo_name
) d,
(
SELECT DISTINCT
f.repo_id,
f.NAME,
f.libyear,
f.data_collection_date
FROM
( SELECT repo_id, NAME, MAX ( data_collection_date ) AS data_collection_date FROM augur_data.repo_deps_libyear WHERE repo_id = :repo_id GROUP BY repo_id, NAME ORDER BY NAME ) e,
augur_data.repo_deps_libyear f
WHERE
e.data_collection_date = f.data_collection_date and
e.repo_id = f.repo_id
ORDER BY
NAME
) C
WHERE
d.repo_id = C.repo_id
AND C.repo_id = :repo_id
GROUP BY
rg_name,
repo_git,
repo_group_id,
repo_name,
d.repo_id,
forked_from,
repo_archived,
c.name,
c.libyear
ORDER BY
repo_id;
""")

with current_app.engine.connect() as conn:
results = pd.read_sql(libyearSQL, conn, params={'repo_id': repo_id})

else:

libyearSQL = s.sql.text("""
Select w.* from
(
SELECT
rg_name,
repo_group_id,
repo_name,
d.repo_id,
repo_git,
forked_from,
repo_archived,
c.name,
c.libyear,
MAX ( C.data_collection_date ) AS most_recent_collection
FROM
(
SELECT A.rg_name AS rg_name,
A.repo_group_id AS repo_group_id,
b.repo_name AS repo_name,
b.repo_id AS repo_id,
b.repo_git AS repo_git,
b.forked_from AS forked_from,
b.repo_archived AS repo_archived
FROM
repo_groups A,
repo b
WHERE
A.repo_group_id = b.repo_group_id
ORDER BY
rg_name,
repo_name
) d,
(
SELECT DISTINCT
f.repo_id,
f.NAME,
f.libyear,
f.data_collection_date
FROM
( SELECT repo_id, NAME, MAX ( data_collection_date ) AS data_collection_date FROM augur_data.repo_deps_libyear GROUP BY repo_id, NAME ORDER BY NAME ) e,
augur_data.repo_deps_libyear f
WHERE
e.data_collection_date = f.data_collection_date and
e.repo_id = f.repo_id
ORDER BY
NAME
) C
WHERE
d.repo_id = C.repo_id
GROUP BY
rg_name,
repo_git,
repo_group_id,
repo_name,
d.repo_id,
forked_from,
repo_archived,
c.name,
c.libyear
ORDER BY
repo_id) w,
repo_groups y,
repo z
where w.repo_id=z.repo_id and
y.repo_group_id=z.repo_group_id
and z.repo_group_id = :repo_group_id
""")

with current_app.engine.connect() as conn:
results = pd.read_sql(libyearSQL, conn, params={'repo_group_id': repo_group_id})
return results

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