v2.0.0
This version of the Python API represents a breaking change from v1, which was mostly needed to accommodate handling multiple annotation types and formats. See more details below.
What's New
- Added
AnnotationFile
to allow multiple annotation files inAnnotation.files
. - Added
TomogramAuthor
to describe multiple authors inTomogram.authors
. Dataset
- Added
cell_component_name
andcell_component_id
. - Added
key_photo_url
andkey_photo_thumbnail_url
.
- Added
DatasetAuthor
- Added
author_list_order
.
- Added
Tomogram
- Added
key_photo_url
andkey_photo_thumbnail_url
. - Added
offset_x
,offset_y
, andoffset_z
. - Added
affine_transformation_matrix
. - Added
type
. - Added
neuroglancer_config
.
- Added
Annotation
- Added
shape
andformat
arguments toAnnotation.download
.
- Added
Breaking Changes
- Tomogram
- Removed downsampled MRC volume URLs:
https_mrc_scale1
,https_mrc_scale2
,s3_mrc_scale1
,s3_mrc_scale2
. - Removed
binning
keyword argument fromTomogram.download_mrcfile
.
- Removed downsampled MRC volume URLs:
- Annotation
- Removed annotation path URLs:
https_annotations_path
,s3_annotations_path
and moved toAnnotationFile.https_path
andAnnotationFile.s3_path
. - Removed
shape_type
and moved toAnnotationFile
. - Removed
object_width
,object_weight
, andobject_diameter
.
- Removed annotation path URLs:
Full changelog: v1.0.1...v2.0.0