Anamic

Simulate, fit and analyze microtubules.

Dependencies

• python > 3.6 (stop using Python 2!)

Install

Clone the repository:

git clone https://github.com/brouhardlab/anamic.git

We suggest you to install Python from the Anaconda distribution. Then you can install the required dependencies in a Conda environment:

cd anamic/
conda create -n anamic_env
conda activate anamic_env
conda env update -f binder/environment.yml

Note that anamic is also a valid Python library with pip:

pip install anamic
# or
pip install https://github.com/brouhardlab/anamic/archive/master.zip

License

Under BSD license. See LICENSE.

Authors

• Claire Edrington <>
• Hadrien Mary [email protected]

Release a new version

• Run tests: pytest -v anamic/.
• Install rever: conda install -y rever.
• Run check: rever check.
• Bump and release new version: rever VERSION_NUMBER.