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Chan Zuckerberg Initiative
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single-cell-curation
single-cell-curation PublicForked from chanzuckerberg/single-cell-curation
Code and documentation for the curation of cellxgene datasets
Python
376 contributions in the last year
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Contribution activity
July 2025
Created 15 commits in 2 repositories
Opened 15 pull requests in 2 repositories
chanzuckerberg/single-cell-curation
14
merged
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editorial
This contribution was made on Jul 17
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updated suspension_type
This contribution was made on Jul 17
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updated sex
This contribution was made on Jul 15
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updated ethnicity
This contribution was made on Jul 14
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updated donor
This contribution was made on Jul 14
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updated development stage
This contribution was made on Jul 14
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updated cell type
This contribution was made on Jul 14
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editorial
This contribution was made on Jul 11
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Updated tissue_ontology_term_id and tissue_type
This contribution was made on Jul 10
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added cellosaurus ontology
This contribution was made on Jul 10
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updated gene references
This contribution was made on Jul 9
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Created 7.0.0 draft
This contribution was made on Jul 9
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approved schema
This contribution was made on Jul 8
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editorial
This contribution was made on Jul 2
chanzuckerberg/data-guidance
1
merged
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Added cell line and organelle
This contribution was made on Jul 16
Reviewed 4 pull requests in 2 repositories
chanzuckerberg/cellxgene-census
3 pull requests
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Fix link to accepted assays
This contribution was made on Jul 21
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Formatting fix for census schema
This contribution was made on Jul 16
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Add spatial to census schema
This contribution was made on Jul 15
chanzuckerberg/data-guidance
1 pull request
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Added cell line and organelle
This contribution was made on Jul 17
Created an issue in chanzuckerberg/single-cell-curation that received 2 comments
Update suspension_type
Design
Appendix A. Changelog
schema v7.0.0
obs (Cell metadata)
Updated requirements for suspension_type
:
Added Cel-seq
Added Quartz-seq
Deleted …
2
comments
Opened 5 other issues in 3 repositories
chanzuckerberg/single-cell
2
open
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CELLxGENE Discover should support pre-analysis submissions
This contribution was made on Jul 17
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CELLxGENE dataset schema 7.0.0 is reviewed and published
This contribution was made on Jul 9
chanzuckerberg/single-cell-curation
2
open
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Redesign metadata layout
This contribution was made on Jul 11
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Update pinned ontology references for schema 7.0.0
This contribution was made on Jul 9
chanzuckerberg/cellxgene-census
1
open
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Draft updates to list of accepted assays and their categories
This contribution was made on Jul 24