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[MRG] Move binder setup to scikit-learn/scikit-learn repo (scikit-lea…
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#!/bin/bash | ||
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set -e | ||
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# This script is called in a binder context. When this script is called, we are | ||
# inside a git checkout of the scikit-learn/scikit-learn repo. This script is | ||
# generating notebooks from the scikit-learn python examples. | ||
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if [[ ! -f /.dockerenv ]]; then | ||
echo "This script was written for repo2docker and is supposed to run inside a docker container." | ||
echo "Exiting because this script can delete data if run outside of a docker container." | ||
exit 1 | ||
fi | ||
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# Back up content we need from the scikit-learn repo | ||
TMP_CONTENT_DIR=/tmp/scikit-learn | ||
mkdir -p $TMP_CONTENT_DIR | ||
cp -r examples .binder $TMP_CONTENT_DIR | ||
# delete everything in current directory including dot files and dot folders | ||
find . -delete | ||
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# Generate notebooks and remove other files from examples folder | ||
GENERATED_NOTEBOOKS_DIR=.generated-notebooks | ||
cp -r $TMP_CONTENT_DIR/examples $GENERATED_NOTEBOOKS_DIR | ||
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find $GENERATED_NOTEBOOKS_DIR -name '*.py' -exec sphx_glr_python_to_jupyter.py '{}' + | ||
NON_NOTEBOOKS=$(find $GENERATED_NOTEBOOKS_DIR -type f | grep -v '\.ipynb') | ||
rm -f $NON_NOTEBOOKS | ||
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# Put the .binder folder back (may be useful for debugging purposes) | ||
mv $TMP_CONTENT_DIR/.binder . | ||
# Final clean up | ||
rm -rf $TMP_CONTENT_DIR | ||
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# This is for compatibility with binder sphinx-gallery integration: this makes | ||
# sure that the binder links generated by sphinx-gallery are correct even tough | ||
# the repo we use for binder (scikit-learn/scikit-learn) is not the repo of the | ||
# generated doc (scikit-learn/scikit-learn.github.io) | ||
mkdir notebooks | ||
ln -s ../$GENERATED_NOTEBOOKS_DIR notebooks/auto_examples |
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--find-links https://sklearn-nightly.scdn8.secure.raxcdn.com scikit-learn | ||
matplotlib | ||
scikit-image | ||
pandas | ||
sphinx-gallery | ||
scikit-learn>=0.22.dev0 | ||
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