Tools to work with manually generated and auto-segmented data in FAFB.

Documentation

FAFBseg is on readthedocs.

Quickstart

Install latest stable version

pip3 install fafbseg

Install from Github

pip3 install git+https://github.com/flyconnectome/fafbseg-py.git

How to cite

If you use fafbseg for your publication, please cite the two FlyWire papers:

1. "Whole-brain annotation and multi-connectome cell typing quantifies circuit stereotypy in Drosophila" Schlegel et al., bioRxiv (2023); doi: https://doi.org/10.1101/2023.06.27.546055
2. "Neuronal wiring diagram of an adult brain" Dorkenwald et al., bioRxiv (2023); doi: https://doi.org/10.1101/2023.06.27.546656