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@bnediction

BNediction

Research project on Predictive Boolean Network Ensembles funded by French ANR (ANR-20-CE45-0001)

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  1. bonesis bonesis Public

    Synthesis and Reprogramming of Most Permissive Boolean Networks

    Python 9 1

  2. mpbn mpbn Public

    Brief Python implementation of Most Permissive Boolean Networks

    Python 19 2

  3. scBoolSeq scBoolSeq Public

    scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics

    Python 5 1

  4. BooleanNetworks.jl BooleanNetworks.jl Public

    Boolean networks in Julia

    Julia 7

Repositories

Showing 10 of 10 repositories
  • scBoolSeq-supplementary Public

    Notebooks demonstrating scBoolSeq for scRNA-Seq binarization and synthetic generation

    bnediction/scBoolSeq-supplementary’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 28, 2024
  • bonesis Public

    Synthesis and Reprogramming of Most Permissive Boolean Networks

    bnediction/bonesis’s past year of commit activity
    Python 9 1 1 0 Updated Jun 25, 2024
  • bnediction.github.io Public

    BNediction webpage

    bnediction/bnediction.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Jun 14, 2024
  • mpbn Public

    Brief Python implementation of Most Permissive Boolean Networks

    bnediction/mpbn’s past year of commit activity
    Python 19 2 0 0 Updated Jun 11, 2024
  • scBoolSeq Public

    scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics

    bnediction/scBoolSeq’s past year of commit activity
    Python 5 1 1 0 Updated May 17, 2024
  • cegar-bonesis Public

    CEGAR for universal properties over minimal trap spaces of Boolean networks

    bnediction/cegar-bonesis’s past year of commit activity
    Python 1 0 0 0 Updated Jul 11, 2023
  • reprogramming-with-bonesis Public

    Executable paper and data demonstrating marker reprogramming of Boolean networks with BoNesis

    bnediction/reprogramming-with-bonesis’s past year of commit activity
    TeX 0 0 0 0 Updated Mar 24, 2023
  • mpbn-sim Public archive

    Simulation of Most Permissive Boolean networks

    bnediction/mpbn-sim’s past year of commit activity
    Python 1 0 0 0 Updated Dec 1, 2022
  • profile_binr Public archive

    PROFILE RNA-seq binarization technique.

    bnediction/profile_binr’s past year of commit activity
    Python 4 BSD-3-Clause 1 0 1 Updated May 23, 2022
  • BooleanNetworks.jl Public

    Boolean networks in Julia

    bnediction/BooleanNetworks.jl’s past year of commit activity
    Julia 7 MIT 0 0 0 Updated Feb 23, 2022

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