Merge pull request #17 from bmeg/feature/substance-and-group

Add SubstanceDefinition and Group

schemas/graph/Annotation.yaml

@@ -3,7 +3,41 @@ additionalProperties: false
 description: Text node with attribution. A  text note which also  contains information
   about who made the statement and when. [See https://hl7.org/fhir/R5/Annotation.html]
 links:
-- href: Patient/{id}
+- href: '{id}'
+  rel: authorReference_Practitioner
+  targetHints:
+    backref:
+    - annotation
+    direction:
+    - outbound
+    multiplicity:
+    - has_one
+    regex_match:
+    - Practitioner/*
+  targetSchema:
+    $ref: Practitioner.yaml
+  templatePointers:
+    id: /authorReference/reference
+  templateRequired:
+  - id
+- href: '{id}'
+  rel: authorReference_PractitionerRole
+  targetHints:
+    backref:
+    - annotation
+    direction:
+    - outbound
+    multiplicity:
+    - has_one
+    regex_match:
+    - PractitionerRole/*
+  targetSchema:
+    $ref: PractitionerRole.yaml
+  templatePointers:
+    id: /authorReference/reference
+  templateRequired:
+  - id
+- href: '{id}'
   rel: authorReference_Patient
   targetHints:
     backref:
@@ -12,12 +46,31 @@ links:
     - outbound
     multiplicity:
     - has_one
+    regex_match:
+    - Patient/*
   targetSchema:
     $ref: Patient.yaml
   templatePointers:
     id: /authorReference/reference
   templateRequired:
   - id
+- href: '{id}'
+  rel: authorReference_Organization
+  targetHints:
+    backref:
+    - annotation
+    direction:
+    - outbound
+    multiplicity:
+    - has_one
+    regex_match:
+    - Organization/*
+  targetSchema:
+    $ref: Organization.yaml
+  templatePointers:
+    id: /authorReference/reference
+  templateRequired:
+  - id
 properties:
   _authorString:
     $ref: FHIRPrimitiveExtension.yaml

schemas/graph/BodyStructure.yaml

@@ -3,6 +3,24 @@ additionalProperties: false
 description: Specific and identified anatomical structure. Record details about an
   anatomical structure.  This resource may be used when a coded concept does not provide
   the necessary detail needed for the use case. [See https://hl7.org/fhir/R5/BodyStructure.html]
+links:
+- href: '{id}'
+  rel: patient
+  targetHints:
+    backref:
+    - body_structure
+    direction:
+    - outbound
+    multiplicity:
+    - has_one
+    regex_match:
+    - Patient/*
+  targetSchema:
+    $ref: Patient.yaml
+  templatePointers:
+    id: /patient/reference
+  templateRequired:
+  - id
 properties:
   _active:
     $ref: FHIRPrimitiveExtension.yaml
@@ -115,6 +133,10 @@ properties:
     pattern: ^[^\s]+(\s[^\s]+)*$
     title: Language of the resource content
     type: string
+  links:
+    items:
+      $ref: https://json-schema.org/draft/2020-12/links
+    type: array
   meta:
     $ref: Meta.yaml
     description: The metadata about the resource. This is content that is maintained

schemas/graph/BodyStructureIncludedStructure.yaml

@@ -2,6 +2,7 @@ $id: BodyStructureIncludedStructure
 additionalProperties: false
 description: Included anatomic location(s). The anatomical location(s) or region(s)
   of the specimen, lesion, or body structure. [See https://hl7.org/fhir/R5/BodyStructureIncludedStructure.html]
+links: []
 properties:
   bodyLandmarkOrientation:
     description: Body locations in relation to a specific body landmark (tatoo, scar,
@@ -45,6 +46,10 @@ properties:
     binding_version: null
     element_property: true
     title: Code that represents the included structure laterality
+  links:
+    items:
+      $ref: https://json-schema.org/draft/2020-12/links
+    type: array
   modifierExtension:
     description: May be used to represent additional information that is not part
       of the basic definition of the element and that modifies the understanding of

schemas/graph/BodyStructureIncludedStructureBodyLandmarkOrientation.yaml

@@ -2,6 +2,7 @@ $id: BodyStructureIncludedStructureBodyLandmarkOrientation
 additionalProperties: false
 description: Landmark relative location. Body locations in relation to a specific
   body landmark (tatoo, scar, other body structure). [See https://hl7.org/fhir/R5/BodyStructureIncludedStructureBodyLandmarkOrientation.html]
+links: []
 properties:
   clockFacePosition:
     binding_description: Select SNOMED CT codes. A set of codes that describe a things
@@ -63,6 +64,10 @@ properties:
       $ref: CodeableConcept.yaml
     title: Body ]andmark description
     type: array
+  links:
+    items:
+      $ref: https://json-schema.org/draft/2020-12/links
+    type: array
   modifierExtension:
     description: May be used to represent additional information that is not part
       of the basic definition of the element and that modifies the understanding of