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added higher level conversion function to exec method #150

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added higher level conversion function to exec method #150

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Commits on Oct 3, 2023

  1. added higher level conversion function to exec method

    @AlexPatrie
    AlexPatrie committed Oct 3, 2023
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Commits on Oct 4, 2023

  1. feat: added spatial library for simularium smoldyn conversion

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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  2. feat: updated optional requirements to reflect new spatial library

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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  3. added immutable instance-metadata parameter

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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  4. chore: added optional default io format to high level util function

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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  5. fix: finished falsy eval

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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  6. chore: updated args and type annotations

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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  7. chore: updated method signature

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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  8. fix: linting fixes

    @AlexPatrie
    AlexPatrie committed Oct 4, 2023
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Commits on Oct 5, 2023

  1. chore: formatted whitespace for ci

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  2. chore: updated utils subdir docstrings

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  3. chore: reformatting

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  4. temp archive scan

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  5. feat: added spatial attributes to common config object and updated co… 

    …mbine exec method
    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  6. feat: implemented simularium converter logic in combine exec method

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  7. chore: removed unused comments

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  8. feat: implemented exec file and method in spatial library

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  9. minor reformat

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  10. chore: updated docstrings

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  11. feat: copied code from smoldyn.biosimulators methods

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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  12. update

    @AlexPatrie
    AlexPatrie committed Oct 5, 2023
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Commits on Oct 6, 2023

  1. chore: updated docstrings

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  2. chore: changed setter scope of default support spatial simulator

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  3. chore: minor reformat

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  4. fix: removed unused constructor param from factory

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  5. chore: reformatted docstrings and code

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  6. updated nomenclature and reformatting

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  7. chore: added test file to ignore to be deleted

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  8. chore: updated doc signature

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  9. rename nomenclature

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  10. minor import dep adjustment

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  11. chore: updated and reformatting

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  12. updated implementation

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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  13. chore: updated exec

    @AlexPatrie
    AlexPatrie committed Oct 6, 2023
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