Updating compiled documentation

biosimulators · Dec 13, 2020 · 984e03e · 984e03e
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diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '0.1.6',
+    VERSION: '0.1.7',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/docs/about.html b/docs/about.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>3. About BioSimulators utils &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>3. About BioSimulators utils &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>

diff --git a/docs/genindex.html b/docs/genindex.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Index &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>Index &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
@@ -663,6 +663,8 @@ <h2 id="G">G</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="source/biosimulators_utils.simulator.html#biosimulators_utils.simulator.specs.gen_algorithms_from_specs">gen_algorithms_from_specs() (in module biosimulators_utils.simulator.specs)</a>
+</li>
+      <li><a href="source/biosimulators_utils.xml.html#biosimulators_utils.xml.utils.get_attributes_of_xpaths">get_attributes_of_xpaths() (in module biosimulators_utils.xml.utils)</a>
 </li>
       <li><a href="source/biosimulators_utils.html#biosimulators_utils.config.get_config">get_config() (in module biosimulators_utils.config)</a>
 </li>
@@ -679,14 +681,12 @@ <h2 id="G">G</h2>
       <li><a href="source/biosimulators_utils.gh_action.html#biosimulators_utils.gh_action.core.GitHubAction.get_issue_number">get_issue_number() (biosimulators_utils.gh_action.core.GitHubAction static method)</a>
 </li>
       <li><a href="source/biosimulators_utils.gh_action.html#biosimulators_utils.gh_action.core.GitHubAction.get_labels_for_issue">get_labels_for_issue() (biosimulators_utils.gh_action.core.GitHubAction class method)</a>
-</li>
-      <li><a href="source/biosimulators_utils.utils.html#biosimulators_utils.utils.logging.get_logger">get_logger() (in module biosimulators_utils.utils.logging)</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="source/biosimulators_utils.combine.html#biosimulators_utils.combine.data_model.CombineArchive.get_master_content">get_master_content() (biosimulators_utils.combine.data_model.CombineArchive method)</a>
+      <li><a href="source/biosimulators_utils.utils.html#biosimulators_utils.utils.logging.get_logger">get_logger() (in module biosimulators_utils.utils.logging)</a>
 </li>
-      <li><a href="source/biosimulators_utils.xml.html#biosimulators_utils.xml.utils.get_num_matches_to_xpaths">get_num_matches_to_xpaths() (in module biosimulators_utils.xml.utils)</a>
+      <li><a href="source/biosimulators_utils.combine.html#biosimulators_utils.combine.data_model.CombineArchive.get_master_content">get_master_content() (biosimulators_utils.combine.data_model.CombineArchive method)</a>
 </li>
       <li><a href="source/biosimulators_utils.gh_action.html#biosimulators_utils.gh_action.core.GitHubAction.gh_action_run_id">gh_action_run_id (biosimulators_utils.gh_action.core.GitHubAction attribute)</a>
 </li>

diff --git a/docs/index.html b/docs/index.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>BioSimulators utils documentation &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>BioSimulators utils documentation &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>

diff --git a/docs/installation.html b/docs/installation.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>1. Installation instructions &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>1. Installation instructions &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>

diff --git a/docs/py-modindex.html b/docs/py-modindex.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Python Module Index &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>Python Module Index &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>

diff --git a/docs/search.html b/docs/search.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Search &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>Search &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="_static/alabaster.css" type="text/css" />
 

diff --git a/docs/searchindex.js b/docs/searchindex.js
diff --git a/docs/source/biosimulators_utils.archive.html b/docs/source/biosimulators_utils.archive.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.1. biosimulators_utils.archive package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.1. biosimulators_utils.archive package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.biosimulations.html b/docs/source/biosimulators_utils.biosimulations.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.2. biosimulators_utils.biosimulations package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.2. biosimulators_utils.biosimulations package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.combine.html b/docs/source/biosimulators_utils.combine.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.3. biosimulators_utils.combine package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.3. biosimulators_utils.combine package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.gh_action.html b/docs/source/biosimulators_utils.gh_action.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.4. biosimulators_utils.gh_action package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.4. biosimulators_utils.gh_action package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.html b/docs/source/biosimulators_utils.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2. biosimulators_utils package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2. biosimulators_utils package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.kisao.html b/docs/source/biosimulators_utils.kisao.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.5. biosimulators_utils.kisao package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.5. biosimulators_utils.kisao package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.plot.html b/docs/source/biosimulators_utils.plot.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.6. biosimulators_utils.plot package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.6. biosimulators_utils.plot package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.report.html b/docs/source/biosimulators_utils.report.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.7. biosimulators_utils.report package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.7. biosimulators_utils.report package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.sedml.html b/docs/source/biosimulators_utils.sedml.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.8. biosimulators_utils.sedml package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.8. biosimulators_utils.sedml package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.simulator.html b/docs/source/biosimulators_utils.simulator.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.9. biosimulators_utils.simulator package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.9. biosimulators_utils.simulator package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
     <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>

diff --git a/docs/source/biosimulators_utils.simulator_registry.html b/docs/source/biosimulators_utils.simulator_registry.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.10. biosimulators_utils.simulator_registry package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.10. biosimulators_utils.simulator_registry package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
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diff --git a/docs/source/biosimulators_utils.utils.html b/docs/source/biosimulators_utils.utils.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>2.1.11. biosimulators_utils.utils package &#8212; BioSimulators utils 0.1.6 documentation</title>
+    <title>2.1.11. biosimulators_utils.utils package &#8212; BioSimulators utils 0.1.7 documentation</title>
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <link rel="stylesheet" href="../_static/alabaster.css" type="text/css" />
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