Fixed problem with Windows line endings in FASTA parser

bioinf · Jul 23, 2013 · 3117ecf · 3117ecf
1 parent 02be754
commit 3117ecf
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/src/fasta.cpp b/src/fasta.cpp
@@ -5,6 +5,7 @@
 //****************************************************************************
 
 #include "fasta.h"
+#include <boost/algorithm/string.hpp>
 
 namespace SyntenyFinder
 {	
@@ -32,6 +33,7 @@ namespace SyntenyFinder
 			while(!inputStream_.eof())
 			{
 				std::getline(inputStream_, buffer);
+				boost::algorithm::trim(buffer);
 
 				if (buffer.empty()) continue;