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Update README.md
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ypriverol committed Nov 23, 2022
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Expand Up @@ -169,6 +169,8 @@ parse_sdrf convert-normalyzerde -s ./testdata/PXD000288.sdrf.tsv -o ./testPXD000
- -mq : Path to MaxQuant experimental design file for mapping MQ sample names. (optional)


# Citation
# Citations

Perez-Riverol, Yasset, and European Bioinformatics Community for Mass Spectrometry. "Toward a Sample Metadata Standard in Public Proteomics Repositories." Journal of Proteome Research 19.10 (2020): 3906-3909. [Manuscript](https://pubs.acs.org/doi/abs/10.1021/acs.jproteome.0c00376)
- Dai C, Füllgrabe A, Pfeuffer J, Solovyeva EM, Deng J, Moreno P, Kamatchinathan S, Kundu DJ, George N, Fexova S, Grüning B, Föll MC, Griss J, Vaudel M, Audain E, Locard-Paulet M, Turewicz M, Eisenacher M, Uszkoreit J, Van Den Bossche T, Schwämmle V, Webel H, Schulze S, Bouyssié D, Jayaram S, Duggineni VK, Samaras P, Wilhelm M, Choi M, Wang M, Kohlbacher O, Brazma A, Papatheodorou I, Bandeira N, Deutsch EW, Vizcaíno JA, Bai M, Sachsenberg T, Levitsky LI, Perez-Riverol Y. A proteomics sample metadata representation for multiomics integration and big data analysis. Nat Commun. 2021 Oct 6;12(1):5854. doi: 10.1038/s41467-021-26111-3. PMID: 34615866; PMCID: PMC8494749. [Manuscript](https://www.nature.com/articles/s41467-021-26111-3)

- Perez-Riverol, Yasset, and European Bioinformatics Community for Mass Spectrometry. "Toward a Sample Metadata Standard in Public Proteomics Repositories." Journal of Proteome Research 19.10 (2020): 3906-3909. [Manuscript](https://pubs.acs.org/doi/abs/10.1021/acs.jproteome.0c00376)

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