Cross-BER Data Integration
The BERtron scratch project is for any scripts, data, documentation, or other files that relate to the BERtron project. It is essentially a catch-all for items intended to be shared with the rest of the project team. The structure of this repository will evolve along with the project requirements.
BERtron is the cross-BER Data Integration initiative involving JGI, EMSL, NMDC, ESS-DIVE, and KBase. The ultimate goal is to develop a common method for querying data from our respective APIs.
Any member of the BERtron Systems Engineering Team may contribute to this project.
Here's a link to the repository's contribution guide, which covers setting up a development environment.
A project roadmap will be forthcoming.
Phase 1 Activities from
Planning Proposal (October 3, 2024)
- Google Drive (for presentations and documents)
- Codeathon 1 (Berkeley Lab, October 29 – 30, 2024)
- Codeathon 2 (Virtual, March 6-7, 2025)
- Codeathon 3 (Berkeley Lab, June 2025) - TBD
- User Interviews (spreadsheet)
- Interview Notes (spreadsheet)
- Insights & Actions (document)
- Affinity Mapping (miro board)
Project Leads
- Kjiersten Fagnan <[email protected]> (Project Lead - LBL/JGI)
- Ratna Saripalli <[email protected]> (Deputy Project Lead - PNNL/EMSL)
- Set Sarrafan <[email protected]> (Software Delivery Manager - LBL/JGI)
Systems Engineering
- Charles Parker <[email protected]> (Engineering Lead - LBL/JGI)
- Eric Cavanna <[email protected]> (LBL/NMDC)
- Shreyas Cholia <[email protected]> (LBL/ESS-DIVE)
- Valerie Hendrix <[email protected]> (LBL/ESS-DIVE)
- James Carr <[email protected]> (PNNL/EMSL)
- Makena Dettmann <[email protected]> (PNNL/EMSL)
- AJ Ireland <[email protected]> (LBL/KBase)
- Jeffrey Johnson <[email protected]> (Cohere Consulting, Inc/KBase - DTS)
User Research
- Steven Wilson <[email protected]> (User Research Lead - LBL/JGI)
- Montana Smith <[email protected]> (PNNL/EMSL)
- Sarah Leichty <[email protected]> (PNNL/EMSL - MONet)
- Erin Bredeweg <[email protected]> (PNNL/EMSL - Fungal)
- Elisha Wood-Charlson <[email protected]> (LBL/KBase - GROW/WHONDRS)
- Joan Damerow <[email protected]> (LBL/ESS-DIVE)
- Alicia Clum <[email protected]> (LBL/NMDC)
Advisory Group
- Douglas
- Emiley
- Charu
- Nigel
- Adam
For questions about this repository, please contact Charles Parker <[email protected]>.
BSD-3-Clause-LBNL Lawrence Berkeley National Labs BSD variant license