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@bcgsc

BC Cancer Canada's Michael Smith Genome Sciences Centre

Sequencing Centre for Genomics and Bioinformatics Research

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  1. RNA-Bloom RNA-Bloom Public

    🌺 reference-free transcriptome assembly for short and long reads

    Java 107 9

  2. LongStitch LongStitch Public

    🪡Correct and scaffold assemblies using long reads

    Makefile 56 8

  3. ntRoot ntRoot Public

    🌳 Human ancestry inference from genomic data

    Python 6

  4. btllib btllib Public

    📚Bioinformatics Technology Lab common code library

    C++ 26 6

  5. ntEdit ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    C++ 70 10

  6. goldrush goldrush Public

    Linear-time de novo Long Read Assembler

    C++ 41 2

Repositories

Showing 10 of 122 repositories
  • ntRoot Public

    🌳 Human ancestry inference from genomic data

    bcgsc/ntRoot’s past year of commit activity
    Python 6 GPL-3.0 0 0 0 Updated Nov 10, 2025
  • btl Public

    🔬 Bioinformatics Technology Lab, Genome Sciences Centre

    bcgsc/btl’s past year of commit activity
    HTML 2 3 4 2 Updated Nov 10, 2025
  • pori_graphkb_api Public

    REST API for the GraphKB project

    bcgsc/pori_graphkb_api’s past year of commit activity
    JavaScript 4 GPL-3.0 1 6 1 Updated Nov 7, 2025
  • pori_python Public
    bcgsc/pori_python’s past year of commit activity
    Python 0 GPL-3.0 2 1 2 Updated Nov 8, 2025
  • pori_ipr_client Public

    Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI

    bcgsc/pori_ipr_client’s past year of commit activity
    TypeScript 8 GPL-3.0 1 0 3 Updated Nov 8, 2025
  • pori_graphkb_schema Public

    Shared package between the API and GUI for GraphKB which holds the schema definitions and schema-related functions

    bcgsc/pori_graphkb_schema’s past year of commit activity
    TypeScript 4 GPL-3.0 0 0 1 Updated Nov 6, 2025
  • pori_ipr_api Public

    Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform

    bcgsc/pori_ipr_api’s past year of commit activity
    JavaScript 8 0 0 1 Updated Nov 3, 2025
  • pori_graphkb_client Public

    Front-end web client for the GraphKB project

    bcgsc/pori_graphkb_client’s past year of commit activity
    TypeScript 9 GPL-3.0 1 14 1 Updated Nov 1, 2025
  • btllib Public

    📚Bioinformatics Technology Lab common code library

    bcgsc/btllib’s past year of commit activity
    C++ 26 6 25 (1 issue needs help) 8 Updated Oct 30, 2025
  • ntSynt Public

    Detecting multi-genome synteny using minimizer graph mapping

    bcgsc/ntSynt’s past year of commit activity
    Python 85 GPL-3.0 2 4 0 Updated Oct 27, 2025
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