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Pengcheng Zhou
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Jun 15, 2016
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@@ -29,4 +29,5 @@ | |
| %% initialization | ||
| cnmfe_init; | ||
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| %% update background | ||
| %% update background | ||
| cnmfe_background; | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,273 @@ | ||
| %% post process | ||
| panel_post = uipanel(... | ||
| 'Parent',main_fig,... | ||
| 'FontUnits',get(0,'defaultuipanelFontUnits'),... | ||
| 'Units','characters',... | ||
| 'Title','Post-Process ',... | ||
| 'Position',[75 42 52 11],... | ||
| 'BackgroundColor',get(0,'defaultuipanelBackgroundColor'),... | ||
| 'BackgroundColorMode',get(0,'defaultuipanelBackgroundColorMode'),... | ||
| 'ParentMode','manual',... | ||
| 'Tag','data_panel',... | ||
| 'FontSize',18,... | ||
| 'FontWeight','bold'); | ||
|
|
||
| %% udpate background | ||
| panel_spatial = uipanel(... | ||
| 'Parent',main_fig,... | ||
| 'FontUnits',get(0,'defaultuipanelFontUnits'),... | ||
| 'Units','characters',... | ||
| 'Title','Background ',... | ||
| 'Position',[130 42 52 11],... | ||
| 'BackgroundColor',get(0,'defaultuipanelBackgroundColor'),... | ||
| 'BackgroundColorMode',get(0,'defaultuipanelBackgroundColorMode'),... | ||
| 'ParentMode','manual',... | ||
| 'Tag','data_panel',... | ||
| 'FontSize',18,... | ||
| 'FontWeight','bold'); | ||
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||
| %% post process | ||
| panel_spatial = uipanel(... | ||
| 'Parent',main_fig,... | ||
| 'FontUnits',get(0,'defaultuipanelFontUnits'),... | ||
| 'Units','characters',... | ||
| 'Title','Spatial',... | ||
| 'Position',[75 29 52 11],... | ||
| 'BackgroundColor',get(0,'defaultuipanelBackgroundColor'),... | ||
| 'BackgroundColorMode',get(0,'defaultuipanelBackgroundColorMode'),... | ||
| 'ParentMode','manual',... | ||
| 'Tag','data_panel',... | ||
| 'FontSize',18,... | ||
| 'FontWeight','bold'); | ||
| % | ||
| %% udpate background | ||
| panel_temporal = uipanel(... | ||
| 'Parent',main_fig,... | ||
| 'FontUnits',get(0,'defaultuipanelFontUnits'),... | ||
| 'Units','characters',... | ||
| 'Title','Temporal ',... | ||
| 'Position',[130 29 52 11],... | ||
| 'BackgroundColor',get(0,'defaultuipanelBackgroundColor'),... | ||
| 'BackgroundColorMode',get(0,'defaultuipanelBackgroundColorMode'),... | ||
| 'ParentMode','manual',... | ||
| 'Tag','data_panel',... | ||
| 'FontSize',18,... | ||
| 'FontWeight','bold'); | ||
| % %% | ||
| % % pushbutton for choosing directory | ||
| % push_dir = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','Directory',... | ||
| % 'Style','pushbutton',... | ||
| % 'Position',[2 9 11 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14, ... | ||
| % 'callback', 'push_dir_callback'); | ||
| % | ||
| % % 'edit' box for typing data directory | ||
| % edit_dir = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String',dir_nm,... | ||
| % 'Style','edit',... | ||
| % 'Position',[14, 9, 50, 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','file_edit', ... | ||
| % 'FontSize', 14, ... | ||
| % 'callback', 'edit_dir_callback'); | ||
| % | ||
| % % push button for choosing data file | ||
| % push_file = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','File',... | ||
| % 'Style','pushbutton',... | ||
| % 'Position',[2 7 11 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14, ... | ||
| % 'callback', 'push_file_callback'); | ||
| % | ||
| % % 'edit' box for typing file name | ||
| % edit_file = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','*.tif or *.mat',... | ||
| % 'Style','edit',... | ||
| % 'Position',[14, 7, 50, 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','file_edit', ... | ||
| % 'FontSize', 14, ... | ||
| % 'callback', 'edit_file_callback'); | ||
| % | ||
| % %% spatial information of the data | ||
| % text_height = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','Height',... | ||
| % 'Style','pushbutton',... | ||
| % 'Position',[2 5 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % | ||
| % text_width = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','Width',... | ||
| % 'Style','pushbutton',... | ||
| % 'Position',[18 5 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % text_frame = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','# Frame',... | ||
| % 'Style','pushbutton',... | ||
| % 'Position',[34 5 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % text_Fs = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','Fs',... | ||
| % 'Style','pushbutton',... | ||
| % 'Position',[50 5 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % | ||
| % %% values | ||
| % edit_height = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','0',... | ||
| % 'Style','edit',... | ||
| % 'Position',[2 3 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % | ||
| % edit_width = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','0',... | ||
| % 'Style','edit',... | ||
| % 'Position',[18 3 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % edit_frame = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','0',... | ||
| % 'Style','edit',... | ||
| % 'Position',[34 3 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % | ||
| % edit_Fs = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String', 10,... | ||
| % 'Style','edit',... | ||
| % 'Position',[50 3 14 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14, ... | ||
| % 'callback', 'Fs=str2double(get(gco, ''string'')); neuron_raw.Fs = Fs;'); | ||
| % | ||
| % % calcium indicator | ||
| % text_indicator = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','Calcium Indicator',... | ||
| % 'Style','pushbutton',... | ||
| % 'Position',[2, 1 30 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14); | ||
| % | ||
| % edit_indicator = uicontrol(... | ||
| % 'Parent',panel_data,... | ||
| % 'FontUnits',get(0,'defaultuicontrolFontUnits'),... | ||
| % 'Units','characters',... | ||
| % 'String','GCaMP6f',... | ||
| % 'Style','edit',... | ||
| % 'Position',[37 1 26.5 1.75],... | ||
| % 'BackgroundColor',get(0,'defaultuicontrolBackgroundColor'),... | ||
| % 'BackgroundColorMode',get(0,'defaultuicontrolBackgroundColorMode'),... | ||
| % 'Callback','%automatic',... | ||
| % 'Children',[],... | ||
| % 'ParentMode','manual',... | ||
| % 'Tag','data_dir',... | ||
| % 'FontSize',14, 'callback', 'neuron_raw.indicator=''GCaMP6f'';'); | ||
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