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  • European School of Molecular Medicine, University of Milan, Italy
  • Italy
  • 21:57 (UTC -12:00)
  • X @wet2drylab

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bablukr056/README.md

πŸ‘‹ Hi, I'm Bablu Kumar

Bablu Kumar

πŸ‘¨β€πŸ”¬ Academic Background

  • πŸŽ“ Ph.D. in Systems Medicine (Computational Biology) (2022-2026)
    • European School of Molecular Medicine (SEMM), Italy
    • University of Milan & University of Bari, Italy
  • 🌍 Current Visiting Research Fellow (Sept 2024 to Current)
    • Life Sciences Center, Vilnius University, Lithuania
  • πŸš€ Visiting Student Researcher (2024)
    • NASA Jet Propulsion Laboratory (JPL), USA – JPL Visiting Student Research Program
  • 🧬 Master of Technology (M.Tech) in Computational Biology
    • Pondicherry University (2020–2022), India
  • πŸ”¬ Bachelor of Technology (B.Tech) in Biotechnology Engineering
    • Amity University, Gurugram (2016-2022), India

πŸ”¬ Research Interests

  • Human Gut Microbiome (Bacteria & Bacteriophages)
  • Bacteriophage Discovery and Functional Annotation
  • NGS Data Analysis (Illumina)
  • NGS Pipeline Development and Optimization
  • Machine Learning for Microbiome-Based Health Prediction
  • DNA/Protein Language Models (focused on CRISPR-Cas)

πŸ§‘β€πŸ« Training & Mentorship

I’ve had the opportunity to train and guide:

  • 50+ PhD candidates
  • 20+ researchers and postdocs
  • 100+ Master’s students + B.Tech/B.Sc. students
  • 30+ industry professionals
    ...in areas like bioinformatics, NGS analysis, microbiome, and machine learning.

πŸ› οΈ Technical Skills

  • Programming: Python, R, Bash
  • Machine Learning Models: Random Forest (RF), Support Vector Machine (SVM), Logistic Regression
  • NGS Analysis: Quality control, read processing, taxonomic/functional profiling
  • HPC Environments: High-throughput computing using HTCondor
  • Resource & Job Management on clusters
  • Data Visualization

πŸ“ Current Focus

I’m currently applying AI tools and classical ML approaches to understand gut microbiome patterns and improve disease prediction, with a special focus on identifying unknown bacterial and viral signatures using NGS data.


πŸ“« Feel free to connect with me for collaborations, mentoring, or microbiome/NGS-related discussions!

Connect with me:

@wet2drylab bablukr056

Languages and Tools:

cplusplus java linux python

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