Set theme to dark and removed the button for light mode

b-heifets · Jun 8, 2024 · d8a9cb9 · d8a9cb9
1 parent 2522fee
commit d8a9cb9
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Showing 108 changed files with 422 additions and 3,298 deletions.
diff --git a/unravel/docs/_build/doctrees/environment.pickle b/unravel/docs/_build/doctrees/environment.pickle
diff --git a/unravel/docs/_build/html/.buildinfo b/unravel/docs/_build/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 18df13b908bcccbc46314f9abed3e965
+config: e1882698a6fd5e2baf97cf3359ebf2a6
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/unravel/docs/_build/html/_modules/index.html b/unravel/docs/_build/html/_modules/index.html
@@ -2,7 +2,7 @@
 <!DOCTYPE html>
 
 
-<html lang="en" data-content_root="../" >
+<html lang="en" data-content_root="../" data-theme="dark">
 
   <head>
     <meta charset="utf-8" />
@@ -12,8 +12,8 @@
 
 
   <script data-cfasync="false">
-    document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
-    document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
+    document.documentElement.dataset.mode = localStorage.getItem("mode") || "dark";
+    document.documentElement.dataset.theme = localStorage.getItem("theme") || "dark";
   </script>
 
   <!-- Loaded before other Sphinx assets -->
@@ -47,7 +47,7 @@
   </head>
 
 
-  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="">
+  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="dark">
 
 
 
@@ -179,18 +179,6 @@
         </div>
 
 
-        <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
     </div>
 
   </div>
@@ -273,22 +261,6 @@
 
 
 
-      <div class="sidebar-header-items__end">
-
-          <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
-      </div>
-
   </div>
 
 

diff --git a/unravel/docs/_build/html/_modules/unravel/cluster_stats/brain_model.html b/unravel/docs/_build/html/_modules/unravel/cluster_stats/brain_model.html
@@ -2,7 +2,7 @@
 <!DOCTYPE html>
 
 
-<html lang="en" data-content_root="../../../" >
+<html lang="en" data-content_root="../../../" data-theme="dark">
 
   <head>
     <meta charset="utf-8" />
@@ -12,8 +12,8 @@
 
 
   <script data-cfasync="false">
-    document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
-    document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
+    document.documentElement.dataset.mode = localStorage.getItem("mode") || "dark";
+    document.documentElement.dataset.theme = localStorage.getItem("theme") || "dark";
   </script>
 
   <!-- Loaded before other Sphinx assets -->
@@ -47,7 +47,7 @@
   </head>
 
 
-  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="">
+  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="dark">
 
 
 
@@ -179,18 +179,6 @@
         </div>
 
 
-        <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
     </div>
 
   </div>
@@ -273,22 +261,6 @@
 
 
 
-      <div class="sidebar-header-items__end">
-
-          <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
-      </div>
-
   </div>
 
 

diff --git a/unravel/docs/_build/html/_modules/unravel/cluster_stats/crop_clusters.html b/unravel/docs/_build/html/_modules/unravel/cluster_stats/crop_clusters.html
@@ -2,7 +2,7 @@
 <!DOCTYPE html>
 
 
-<html lang="en" data-content_root="../../../" >
+<html lang="en" data-content_root="../../../" data-theme="dark">
 
   <head>
     <meta charset="utf-8" />
@@ -12,8 +12,8 @@
 
 
   <script data-cfasync="false">
-    document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
-    document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
+    document.documentElement.dataset.mode = localStorage.getItem("mode") || "dark";
+    document.documentElement.dataset.theme = localStorage.getItem("theme") || "dark";
   </script>
 
   <!-- Loaded before other Sphinx assets -->
@@ -47,7 +47,7 @@
   </head>
 
 
-  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="">
+  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="dark">
 
 
 
@@ -179,18 +179,6 @@
         </div>
 
 
-        <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
     </div>
 
   </div>
@@ -273,22 +261,6 @@
 
 
 
-      <div class="sidebar-header-items__end">
-
-          <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
-      </div>
-
   </div>
 
 

diff --git a/unravel/docs/_build/html/_modules/unravel/cluster_stats/effect_sizes/effect_sizes.html b/unravel/docs/_build/html/_modules/unravel/cluster_stats/effect_sizes/effect_sizes.html
@@ -2,7 +2,7 @@
 <!DOCTYPE html>
 
 
-<html lang="en" data-content_root="../../../../" >
+<html lang="en" data-content_root="../../../../" data-theme="dark">
 
   <head>
     <meta charset="utf-8" />
@@ -12,8 +12,8 @@
 
 
   <script data-cfasync="false">
-    document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
-    document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
+    document.documentElement.dataset.mode = localStorage.getItem("mode") || "dark";
+    document.documentElement.dataset.theme = localStorage.getItem("theme") || "dark";
   </script>
 
   <!-- Loaded before other Sphinx assets -->
@@ -47,7 +47,7 @@
   </head>
 
 
-  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="">
+  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="dark">
 
 
 
@@ -179,18 +179,6 @@
         </div>
 
 
-        <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
     </div>
 
   </div>
@@ -273,22 +261,6 @@
 
 
 
-      <div class="sidebar-header-items__end">
-
-          <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
-      </div>
-
   </div>
 
 

diff --git a/...build/html/_modules/unravel/cluster_stats/effect_sizes/effect_sizes_by_sex__absolute.html b/...build/html/_modules/unravel/cluster_stats/effect_sizes/effect_sizes_by_sex__absolute.html
@@ -2,7 +2,7 @@
 <!DOCTYPE html>
 
 
-<html lang="en" data-content_root="../../../../" >
+<html lang="en" data-content_root="../../../../" data-theme="dark">
 
   <head>
     <meta charset="utf-8" />
@@ -12,8 +12,8 @@
 
 
   <script data-cfasync="false">
-    document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
-    document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
+    document.documentElement.dataset.mode = localStorage.getItem("mode") || "dark";
+    document.documentElement.dataset.theme = localStorage.getItem("theme") || "dark";
   </script>
 
   <!-- Loaded before other Sphinx assets -->
@@ -47,7 +47,7 @@
   </head>
 
 
-  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="">
+  <body data-bs-spy="scroll" data-bs-target=".bd-toc-nav" data-offset="180" data-bs-root-margin="0px 0px -60%" data-default-mode="dark">
 
 
 
@@ -179,18 +179,6 @@
         </div>
 
 
-        <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
     </div>
 
   </div>
@@ -273,22 +261,6 @@
 
 
 
-      <div class="sidebar-header-items__end">
-
-          <div class="navbar-item">
-
-<script>
-document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
-  </button>
-`);
-</script></div>
-
-      </div>
-
   </div>