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b-heifets · Aug 1, 2024 · 650b46f · 650b46f
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diff --git a/unravel/docs/_build/doctrees/environment.pickle b/unravel/docs/_build/doctrees/environment.pickle
diff --git a/unravel/docs/_build/doctrees/installation.doctree b/unravel/docs/_build/doctrees/installation.doctree
diff --git a/unravel/docs/_build/html/_sources/installation.md.txt b/unravel/docs/_build/html/_sources/installation.md.txt
@@ -12,6 +12,13 @@
 ```bash
 pip install heifetslab-unravel
 ```
+* Or, for an editable install run:
+```bash
+git clone https://github.com/b-heifets/UNRAVEL.git
+cd UNRAVEL
+pip install -e .
+```
+* Download atlas/template files: [Google Drive Link](https://drive.google.com/drive/folders/1iZjQlPc2kPagnVsjWEFFObLlkSc2yRf9?usp=sharing)
 * Install [FSL](https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallation)
 * Install [Ilastik](https://www.ilastik.org/download.html)
 
@@ -69,10 +76,6 @@ For more detailed information, you can view the commit history:
     - Open your installed Linux distribution from the Start menu.
     - Follow the prompts to set up your username and password.
 
-4. **Enable copy and paste:**
-
-    - 
-
 :::{note}
 After WSL is installed, you may open and use the WSL app. 
 
@@ -155,7 +158,7 @@ For detailed instructions, visit the [WSL Installation Guide](https://docs.micro
     pip install heifetslab-unravel
     ```
 
-4. **Download atlas/template files and locate them in `./atlas/`:**
+4. **Download atlas/template files:**
     [Google Drive Link](https://drive.google.com/drive/folders/1iZjQlPc2kPagnVsjWEFFObLlkSc2yRf9?usp=sharing)
 
 :::{todo}

diff --git a/unravel/docs/_build/html/installation.html b/unravel/docs/_build/html/installation.html
@@ -373,6 +373,15 @@ <h2>TL;DR<a class="headerlink" href="#tl-dr" title="Link to this heading">#</a><
 </pre></div>
 </div>
 <ul class="simple">
+<li><p>Or, for an editable install run:</p></li>
+</ul>
+<div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>git<span class="w"> </span>clone<span class="w"> </span>https://github.com/b-heifets/UNRAVEL.git
+<span class="nb">cd</span><span class="w"> </span>UNRAVEL
+pip<span class="w"> </span>install<span class="w"> </span>-e<span class="w"> </span>.
+</pre></div>
+</div>
+<ul class="simple">
+<li><p>Download atlas/template files: <a class="reference external" href="https://drive.google.com/drive/folders/1iZjQlPc2kPagnVsjWEFFObLlkSc2yRf9?usp=sharing">Google Drive Link</a></p></li>
 <li><p>Install <a class="reference external" href="https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallation">FSL</a></p></li>
 <li><p>Install <a class="reference external" href="https://www.ilastik.org/download.html">Ilastik</a></p></li>
 </ul>
@@ -425,11 +434,6 @@ <h2>Setting Up Windows Subsystem for Linux (WSL)<a class="headerlink" href="#set
 <li><p>Follow the prompts to set up your username and password.</p></li>
 </ul>
 </li>
-<li><p><strong>Enable copy and paste:</strong></p>
-<ul class="simple">
-<li></li>
-</ul>
-</li>
 </ol>
 <div class="admonition note">
 <p class="admonition-title">Note</p>
@@ -500,7 +504,7 @@ <h3 class="rubric" id="option-b-using-venv">Option B: Using venv</h3>
 </pre></div>
 </div>
 </li>
-<li><p><strong>Download atlas/template files and locate them in <code class="docutils literal notranslate"><span class="pre">./atlas/</span></code>:</strong>
+<li><p><strong>Download atlas/template files:</strong>
 <a class="reference external" href="https://drive.google.com/drive/folders/1iZjQlPc2kPagnVsjWEFFObLlkSc2yRf9?usp=sharing">Google Drive Link</a></p></li>
 </ol>
 <div class="admonition-todo admonition" id="id1">

diff --git a/unravel/docs/_build/html/searchindex.js b/unravel/docs/_build/html/searchindex.js