Sensitivity analysis of salmon survival in Puget Sound

Article: Effect of multiple pressures on early marine survival of juvenile salmon in Puget Sound

Package for the analysis of cumulative impacts on salmon survival in Puget Sound. Simulated using an Atlantis Ecosystem model

Hem Nalini Morzaria-Luna^1,2^, Isaac C. Kaplan^3^, Chris J. Harvey^3^, Michael Schmidt^1,4^, Elizabeth A. Fulton^5^, Raphael Girardin^6^, and Parker MacCready^7^

1. Long Live The Kings. 1326 5th Ave #450, Seattle, WA 98101. Corresponding author
2. Visiting scientist. Northwest Fisheries Science Center, NOAA-Fisheries. 2725 Montlake Blvd. East. Seattle, WA, 98112
3. Northwest Fisheries Science Center, NOAA-Fisheries. 2725 Montlake Blvd. East. Seattle, WA, 98112
4. Current address: Western Fisheries Research Center. United States Geological Survey, 6505 NE 65th Street, Seattle, WA 98115-5016
5. Commonwealth Scientific and Industrial Research Organization. Marine and Atmospheric Research. GPO Box 1538. Hobart, Tasmania 7001. Australia
6. IFREMER Centre Manche-Mer du Nord. Unité Halieutique Manche-Mer du Nord. Channel and North Sea Fisheries Research Unit. 150, Quai Gambetta, BP 699, 62321 Boulogne-sur-Mer, France.
7. School of Oceanography. 313 Ocean Sciences Building. University of Washington, Box 355351. Seattle, WA

To install package

install.package("devtools") devtools::install_github("hmorzaria/pssalmonsurvival") Package uses Large File System, if pulling repository from Github run 'git lfs fetch' afterwards